RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TSPAN14Q8NG11 270 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 MCCC1Q96RQ3 725 aaPredicted RBP22.22■■□□□ 1.15
LDB1-201ENST00000361198 FAM126AQ9BYI3 521 aaPredicted RBP22.22■■□□□ 1.15
LDB1-201ENST00000361198 CPEB1Q9BZB8 566 aaKnown RBP22.22■■□□□ 1.15
LDB1-201ENST00000361198 OLAHQ9NV23 265 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 AIG1Q9NVV5 245 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 ELOVL2Q9NXB9 296 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 GMPR2Q9P2T1 348 aaKnown RBP22.22■■□□□ 1.15
LDB1-201ENST00000361198 ST14Q9Y5Y6 855 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 NOTCH4Q99466 2003 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 ZNF839A8K0R7 811 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 ANGPT2O15123 496 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 TAPBPO15533 448 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 CAPN1P07384 714 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 RHOP08100 348 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 RPS6KA3P51812 740 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 GTF2H2Q13888 395 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 ATP13A5Q4VNC0 1218 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 GTF2H2CQ6P1K8 395 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 Q6ZSR9 355 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 IRF7Q92985 503 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 ARMC5Q96C12 935 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 TMEM79Q9BSE2 394 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 C1orf50Q9BV19 199 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 APOL5Q9BWW9 433 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 PNPLA3Q9NST1 481 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 WBP1LQ9NX94 342 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 PTBP2Q9UKA9 531 aaKnown RBP22.22■■□□□ 1.15
LDB1-201ENST00000361198 OARD1Q9Y530 152 aa22.22■■□□□ 1.15
LDB1-201ENST00000361198 PLXNB3Q9ULL4 1909 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 A0A1B0GTW7 788 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 H3BNH8 94 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 TIPRLO75663 272 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 POP4O95707 220 aaKnown RBP22.21■■□□□ 1.15
LDB1-201ENST00000361198 S100BP04271 92 aaPredicted RBP22.21■■□□□ 1.15
LDB1-201ENST00000361198 TYRP14679 529 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 PTPN2P17706 415 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 HSPA7P48741 367 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 PRKCQQ04759 706 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 SPATS1Q496A3 300 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 TMEM259Q4ZIN3 620 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 OR4F6Q8NGB9 312 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 METTL6Q8TCB7 284 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 POF1BQ8WVV4 589 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 PPWD1Q96BP3 646 aaKnown RBP22.21■■□□□ 1.15
LDB1-201ENST00000361198 CEPT1Q9Y6K0 416 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 CDH23Q9H251 3354 aa22.21■■□□□ 1.15
LDB1-201ENST00000361198 CKMT2P17540 419 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 CTNNB1P35222 781 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 HTR6P50406 440 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 BNIP2Q12982 314 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 C6orf136Q5SQH8 315 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 LCN8Q6JVE9 175 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 FBXO46Q6PJ61 603 aaPredicted RBP22.2■■□□□ 1.15
LDB1-201ENST00000361198 PACRGLQ8N7B6 248 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 TSPEARQ8WU66 669 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 HBEGFQ99075 208 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 CEP44Q9C0F1 390 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 BRD9Q9H8M2 597 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 THEGQ9P2T0 379 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 HCFC2Q9Y5Z7 792 aa22.2■■□□□ 1.15
LDB1-201ENST00000361198 KLHL33A6NCF5 533 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 CCDC160A6NGH7 325 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 KATNA1O75449 491 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 CDH2P19022 906 aaPredicted RBP22.2■■□□□ 1.14
LDB1-201ENST00000361198 NSG1P42857 185 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 ZFP36L2P47974 494 aaKnown RBP22.2■■□□□ 1.14
LDB1-201ENST00000361198 ALDH3B2P48448 385 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 PTPN5P54829 565 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 YBX1P67809 324 aaKnown RBP22.2■■□□□ 1.14
LDB1-201ENST00000361198 NTHL1P78549 312 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 INTS11Q5TA45 600 aaKnown RBP22.2■■□□□ 1.14
LDB1-201ENST00000361198 ADIPOR2Q86V24 386 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 MFSD2AQ8NA29 543 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 TFAP2CQ92754 450 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 IPPKQ9H8X2 491 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 PFDN4Q9NQP4 134 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 SPHK2Q9NRA0 654 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 MYRFQ9Y2G1 1151 aa22.2■■□□□ 1.14
LDB1-201ENST00000361198 PDLIM1O00151 329 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 HNRNPRO43390 633 aaKnown RBP22.19■■□□□ 1.14
LDB1-201ENST00000361198 SLC6A2P23975 617 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 DDX6P26196 483 aaKnown RBP eCLIP22.19■■□□□ 1.14
LDB1-201ENST00000361198 BMPR1AP36894 532 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 GDF5P43026 501 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 MRPL19P49406 292 aaKnown RBP22.19■■□□□ 1.14
LDB1-201ENST00000361198 UFM1P61960 85 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 ERVK-8P63133 956 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 B4GALNT1Q00973 533 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 FOXM1Q08050 763 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 LY6G5CQ5SRR4 150 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 TMEM215Q68D42 235 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 VPS33AQ96AX1 596 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 ZNF641Q96N77 438 aaPredicted RBP22.19■■□□□ 1.14
LDB1-201ENST00000361198 CCT7Q99832 543 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 EGFL8Q99944 293 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 TRIM15Q9C019 465 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 BRINP2Q9C0B6 783 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 RIC8BQ9NVN3 520 aa22.19■■□□□ 1.14
LDB1-201ENST00000361198 ZDHHC3Q9NYG2 299 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms