RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 GPR89BP0CG08 455 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 CCR10P46092 362 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 GSTM4Q03013 218 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 DMTNQ08495 405 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 DMWDQ09019 674 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 SF3A3Q12874 501 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 TGFBIQ15582 683 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 PFKFB4Q16877 469 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 MAMSTRQ6ZN01 415 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 CFAP206Q8IYR0 622 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 SLC22A15Q8IZD6 547 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 OXR1Q8N573 874 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 PTGR2Q8N8N7 351 aaPredicted RBP17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 PIWIL2Q8TC59 973 aaKnown RBP17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 ASB11Q8WXH4 323 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 TMEM159Q96B96 161 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 SIKE1Q9BRV8 207 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 COG4Q9H9E3 785 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 MRPL40Q9NQ50 206 aaKnown RBP17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 UTP6Q9NYH9 597 aaKnown RBP17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 HS3ST3A1Q9Y663 406 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 LRRC14BA6NHZ5 514 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 NCF1BA6NI72 391 aaPredicted RBP17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 NCF1CA8MVU1 366 aaPredicted RBP17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 LIN7AO14910 233 aaPredicted RBP17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 NCF1P14598 390 aaPredicted RBP17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 CCR3P51677 355 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 RCN2Q14257 317 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 NFE2L1Q14494 772 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 NFATC4Q14934 902 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 ABCA7Q8IZY2 2146 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 HM13Q8TCT9 377 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 SCARF2Q96GP6 870 aaPredicted RBP17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 FGF22Q9HCT0 170 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 ZNHIT2Q9UHR6 403 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 OARD1Q9Y530 152 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 SLCO1B1Q9Y6L6 691 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 USH1CQ9Y6N9 552 aa17.77■□□□□ 0.43
SMARCD3-202ENST00000356800 BDP1A6H8Y1 2624 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 MUC3AQ02505 3323 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 PRAMEF26H0Y7S4 382 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 GFYI3L273 518 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 AXIN1O15169 862 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 KMOO15229 486 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 SIX3O95343 332 aaPredicted RBP17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 MATN4O95460 622 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 GFAPP14136 432 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 AOC1P19801 751 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 IMPDH1P20839 514 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 MAGEA9P43362 315 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 FBXO48Q5FWF7 155 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 RPS27LQ71UM5 84 aaKnown RBP17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 ABI3BPQ7Z7G0 1075 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 AMZ2Q86W34 360 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 LSMEM2Q8N112 164 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 FBXO39Q8N4B4 442 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 DEFB119Q8N690 84 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 CCNYL1Q8N7R7 359 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 RFWD2Q8NHY2 731 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 SKA2Q8WVK7 121 aaPredicted RBP17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 L3HYPDHQ96EM0 354 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 THOC1Q96FV9 657 aaKnown RBP17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 CNDP1Q96KN2 507 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 KCNK13Q9HB14 408 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 NUDT4Q9NZJ9 180 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 HAO1Q9UJM8 370 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 DMTF1Q9Y222 760 aa17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 DNMT3AQ9Y6K1 912 aaPredicted RBP17.76■□□□□ 0.43
SMARCD3-202ENST00000356800 A0A1W2PPC4 97 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 FFAR2O15552 330 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 DCXO43602 365 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 HSPA4LO95757 839 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 C8GP07360 202 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 CHRNGP07510 517 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 AGTR2P50052 363 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 HERVK_113P63132 956 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 ABRQ12979 859 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 PYCR3Q53H96 274 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 UNC50Q53HI1 259 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 TJAP1Q5JTD0 557 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 ZNF678Q5SXM1 525 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 FRA10AC1Q70Z53 315 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 UBE2R2Q712K3 238 aaPredicted RBP17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 WDR75Q8IWA0 830 aaKnown RBP17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 SLC12A9Q9BXP2 914 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 ERVK-6Q9BXR3 956 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 RMI1Q9H9A7 625 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 KCNK4Q9NYG8 393 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 CD274Q9NZQ7 290 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 DCTN4Q9UJW0 460 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 PNMA8BQ9ULN7 279 aaPredicted RBP17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 TMCO1Q9UM00 188 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 SUFUQ9UMX1 484 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 PDE10AQ9Y233 779 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 DNAJC16Q9Y2G8 782 aa17.75■□□□□ 0.43
SMARCD3-202ENST00000356800 GON4LQ3T8J9 2241 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 METTL12A8MUP2 240 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 NDUFS2O75306 463 aa17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 ALDH18A1P54886 795 aaKnown RBP17.74■□□□□ 0.43
SMARCD3-202ENST00000356800 GALNT1Q10472 559 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms