RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TAS1R3Q7RTX0 852 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 ZDHHC21Q8IVQ6 265 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 LMO3Q8TAP4 145 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 AP3S1Q92572 193 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 MFSD1Q9H3U5 465 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 AKTIPQ9H8T0 292 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 NFS1Q9Y697 457 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 FZD9O00144 591 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 TFECO14948 347 aaPredicted RBP15.78■□□□□ 0.12
PTPN11-201ENST00000351677 PRPS2P11908 318 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 MSANTD2Q6P1R3 559 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 CYP2U1Q7Z449 544 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 PQLC3Q8N755 202 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 SLC39A3Q9BRY0 314 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 ECI2O75521 394 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 CCR10P46092 362 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 CRHR2Q13324 411 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 FAM131AQ6UXB0 335 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 ZC3HC1Q86WB0 502 aaKnown RBP15.78■□□□□ 0.12
PTPN11-201ENST00000351677 C2orf15Q8WU43 125 aaKnown RBP15.78■□□□□ 0.12
PTPN11-201ENST00000351677 HTRA1Q92743 480 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 PYCR2Q96C36 320 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 NSMCE3Q96MG7 304 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 FBXW2Q9UKT8 454 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 ABCC6O95255 1503 aa15.78■□□□□ 0.12
PTPN11-201ENST00000351677 DLX3O60479 287 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 OLR1P78380 273 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 RBM20Q5T481 1227 aaKnown RBP15.77■□□□□ 0.12
PTPN11-201ENST00000351677 ZNF483Q8TF39 744 aaPredicted RBP15.77■□□□□ 0.12
PTPN11-201ENST00000351677 SUSD3Q96L08 255 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 FADS2P1A8MWK0 482 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 SAP18O00422 153 aaKnown RBP15.77■□□□□ 0.12
PTPN11-201ENST00000351677 GMFGO60234 142 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 PLOD3O60568 738 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 CDKN2AIPNLQ96HQ2 116 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 FCRL4Q96PJ5 515 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 GPR88Q9GZN0 384 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 CXorf21Q9HAI6 301 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 ZNF222Q9UK12 451 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 SSNA1O43805 119 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 XRCC1P18887 633 aaPredicted RBP15.77■□□□□ 0.12
PTPN11-201ENST00000351677 HCAR3P49019 387 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 HMGCS1Q01581 520 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 RFTN2Q52LD8 501 aaPredicted RBP15.77■□□□□ 0.12
PTPN11-201ENST00000351677 KCTD8Q6ZWB6 473 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 SNX20Q7Z614 316 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 ATXN10Q9UBB4 475 aa15.77■□□□□ 0.12
PTPN11-201ENST00000351677 TPST2O60704 377 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 GNRH1P01148 92 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 KCNQ1P51787 676 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 ACLYP53396 1101 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 FLCNQ8NFG4 579 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 FEM1AQ9BSK4 669 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 TRIT1Q9H3H1 467 aaKnown RBP15.77■□□□□ 0.11
PTPN11-201ENST00000351677 FAM234BA2RU67 622 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 K7EPI3 171 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 KLHL18O94889 574 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 RASGRP1O95267 797 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 KELP23276 732 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 ITPKBP27987 946 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 DCST1Q5T197 706 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 FAM171BQ6P995 826 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 RPS27LQ71UM5 84 aaKnown RBP15.77■□□□□ 0.11
PTPN11-201ENST00000351677 GALNT13Q8IUC8 556 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 SLAIN1Q8ND83 568 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 AUTS2Q8WXX7 1259 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 NODALQ96S42 347 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 NFKBIL1Q9UBC1 381 aaPredicted RBP15.77■□□□□ 0.11
PTPN11-201ENST00000351677 CLEC4AQ9UMR7 237 aa15.77■□□□□ 0.11
PTPN11-201ENST00000351677 H3BNX3 289 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 SLC22A2O15244 555 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 FANCGO15287 622 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 SAGP10523 405 aaPredicted RBP15.76■□□□□ 0.11
PTPN11-201ENST00000351677 PTPN2P17706 415 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 STAT5AP42229 794 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 SEPHS1P49903 392 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 SEC13P55735 322 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 MYBPC1Q00872 1141 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 LAPTM5Q13571 262 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 RFTN1Q14699 578 aaPredicted RBP15.76■□□□□ 0.11
PTPN11-201ENST00000351677 IRAK1BP1Q5VVH5 260 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 CHST15Q7LFX5 561 aaPredicted RBP15.76■□□□□ 0.11
PTPN11-201ENST00000351677 TTC29Q8NA56 475 aaPredicted RBP15.76■□□□□ 0.11
PTPN11-201ENST00000351677 PPM1HQ9ULR3 514 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 SQORQ9Y6N5 450 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 A0A1W2PRU2 124 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 KHDRBS3O75525 346 aaKnown RBP15.76■□□□□ 0.11
PTPN11-201ENST00000351677 NT5EP21589 574 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 ERVK-8P63133 956 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 UBXN11Q5T124 520 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 FRMD7Q6ZUT3 714 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 SMOQ99835 787 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 NFKB2Q00653 900 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 POMZP3Q6PJE2 187 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 DNASE1L2Q92874 299 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 ART5Q96L15 291 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 ABCB9Q9NP78 766 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 DGKGP49619 791 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 SLC18A1P54219 525 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 HM13Q8TCT9 377 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms