RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TIMM22Q9Y584 194 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 A0A0J9YVX5 310 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 OR5K4A6NMS3 321 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 ENPP3O14638 875 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 LBPP18428 481 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 EPORP19235 508 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 CCDC142Q17RM4 750 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 DPY19L2P1Q6NXN4 242 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 OLFML1Q6UWY5 402 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 ADAMTS15Q8TE58 950 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 NACC2Q96BF6 587 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 GAL3ST4Q96RP7 486 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 GBA3Q9H227 469 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 TXNRD2Q9NNW7 524 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 COMMD3-BMI1R4GMX3 469 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 FAM159BA6NKW6 160 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 LDOC1O95751 146 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-202ENST00000346436 FCGR1AP12314 374 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 PPIBP23284 216 aaKnown RBP10.74□□□□□ -0.69
CLCN6-202ENST00000346436 RBPJQ06330 500 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 GPR17Q13304 367 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 FGD3Q5JSP0 725 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 CFAP206Q8IYR0 622 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 TMEM145Q8NBT3 493 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 FBXO27Q8NI29 283 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 HBEGFQ99075 208 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 ACAT2Q9BWD1 397 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 MRPS26Q9BYN8 205 aaKnown RBP10.74□□□□□ -0.69
CLCN6-202ENST00000346436 PIGVQ9NUD9 493 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 STYXL1Q9Y6J8 313 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 LINC00854A0A1B0GVQ3 168 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 WASHC1A8K0Z3 465 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 WASH3PC4AMC7 463 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 CER1O95813 267 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 NUP62P37198 522 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 PBX3P40426 434 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 SIM2Q14190 667 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 MAPK11Q15759 364 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 TRIM71Q2Q1W2 868 aaKnown RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.73□□□□□ -0.692e-9■■□□□ 11.6
CLCN6-202ENST00000346436 PLEKHG4Q58EX7 1191 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 ADGRF1Q5T601 910 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 WASH2PQ6VEQ5 465 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 PRPF19Q9UMS4 504 aaKnown RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 VWA7Q9Y334 891 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 MTF2Q9Y483 593 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 TOGARAM1Q9Y4F4 1720 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 RFPL1O75677 317 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 PCSK2P16519 638 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 ZNF132P52740 706 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 SLC18A1P54219 525 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 DLG1Q12959 904 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 PIK3R6Q5UE93 754 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 GPR107Q5VW38 600 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 FAM171BQ6P995 826 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 GDPD4Q6W3E5 623 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 ZYG11AQ6WRX3 759 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 BNIPLQ7Z465 357 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 CIR1Q86X95 450 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 DDX60Q8IY21 1712 aaKnown RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 PLD6Q8N2A8 252 aaKnown RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 DEFB123Q8N688 67 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 GMLQ99445 158 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 ADAMTS10Q9H324 1103 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 AGO3Q9H9G7 860 aaKnown RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 CAB39Q9Y376 341 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 DUX1O43812 170 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 CNOT3O75175 753 aaKnown RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 OAS1P00973 400 aaKnown RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 NUDT1P36639 197 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 PITX1P78337 314 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 CNPY1Q3B7I2 92 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 ARHGAP40Q5TG30 622 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 TAC4Q86UU9 113 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 RELL1Q8IUW5 271 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 ITFG1Q8TB96 612 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 B3GALT6Q96L58 329 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 SIGLEC10Q96LC7 697 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 ZNF607Q96SK3 696 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 VPS4AQ9UN37 437 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 C9IYK1 514 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 DSC2Q02487 901 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 ENPEPQ07075 957 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 IL10RBQ08334 325 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 EIF4HQ15056 248 aaKnown RBP10.73□□□□□ -0.69
CLCN6-202ENST00000346436 C9orf64Q5T6V5 341 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 RHBDD1Q8TEB9 315 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 KLK6Q92876 244 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 ESAMQ96AP7 390 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 B4GALT7Q9UBV7 327 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 ADAM30Q9UKF2 790 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 MKL2Q9ULH7 1088 aa10.73□□□□□ -0.69
CLCN6-202ENST00000346436 A0A0J9YYE9 177 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 INSIG1O15503 277 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 FFAR2O15552 330 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 TMCC2O75069 709 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 KLHL18O94889 574 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 RHOP08100 348 aa10.72□□□□□ -0.69
CLCN6-202ENST00000346436 XRCC1P18887 633 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-202ENST00000346436 DRD1P21728 446 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms