RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 WNT7BP56706 349 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 FAM78AQ5JUQ0 283 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 Q7L0L9 218 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 CPNE8Q86YQ8 564 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 RHBDD1Q8TEB9 315 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 MARK4Q96L34 752 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 SSU72Q9NP77 194 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 FZD3Q9NPG1 666 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 GVINP1Q7Z2Y8 2422 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 SIN3BO75182 1162 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 PROCP04070 461 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 SERPINA6P08185 405 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 PIM1P11309 404 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 PAICSP22234 425 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 OC90Q02509 493 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 C2orf80Q0P641 193 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 NCF4Q15080 339 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 RBM18Q96H35 190 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 HIC2Q96JB3 615 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 STRADBQ9C0K7 418 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 SPAG4Q9NPE6 437 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 PCDHGA4Q9Y5G9 962 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 LIN7AO14910 233 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 APBB3O95704 486 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 TCF4P15884 667 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 NT5EP21589 574 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 S100A5P33763 92 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 AP1S2P56377 157 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 FASTKD3Q14CZ7 662 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 WASHC2DQ5SRD0 308 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 LUZP2Q86TE4 346 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 RTN4RL1Q86UN2 441 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 PHF7Q9BWX1 381 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 DDX18Q9NVP1 670 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 MAST2Q6P0Q8 1798 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 TOGARAM1Q9Y4F4 1720 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 ATP6AP2A0A1C7CYW4 349 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 CNOT3O75175 753 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 ATP6AP2O75787 350 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 ANXA4P09525 319 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 EPHA3P29320 983 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 CCR8P51685 355 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 C1DQ13901 141 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 TSNQ15631 228 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 HSFX1Q9UBD0 423 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 EIF2B4Q9UI10 523 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 LILRB3O75022 631 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 AP2A2O94973 939 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 HOXB6P17509 224 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 FBXO48Q5FWF7 155 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 TCHHL1Q5QJ38 904 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 EMC10Q5UCC4 262 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 FAM20CQ8IXL6 584 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 NAT8LQ8N9F0 302 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 KLHL4Q9C0H6 718 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 RERGLQ9H628 205 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 SLC17A7Q9P2U7 560 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 CD70P32970 193 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 KLC1Q07866 573 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 DSC3Q14574 896 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 CCDC81Q6ZN84 652 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 ZNF786Q8N393 782 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 TWIST2Q8WVJ9 160 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 APOL4Q9BPW4 351 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 SLC28A2O43868 658 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 PGLSO95336 258 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 SLC6A2P23975 617 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 MLLT3P42568 568 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 KIR3DL1P43629 444 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 GALK1P51570 392 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 BNIP2Q12982 314 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 RNF43Q68DV7 783 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 SLC43A3Q8NBI5 491 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 SETD9Q8NE22 299 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 OR52L1Q8NGH7 329 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 SCAMP4Q969E2 229 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 ZBP1Q9H171 429 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 USP29Q9HBJ7 922 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 MRM3Q9HC36 420 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 COPS7AQ9UBW8 275 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 APOBEC3BQ9UH17 382 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 TRPS1Q9UHF7 1281 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 CHURC1-FNTBB4DL54 471 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 GRID2O43424 1007 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 TAS2R39P59534 338 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 HEPACAMQ14CZ8 416 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 PPM1JQ5JR12 505 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 C16orf87Q6PH81 154 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 ZNF276Q8N554 614 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 TMEM145Q8NBT3 493 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 AGAP2Q99490 1192 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 CCDC28BQ9BUN5 200 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 MECRQ9BV79 373 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 TMEM109Q9BVC6 243 aa16.13■□□□□ 0.17
SMARCA4-201ENST00000344626 LRRC14BA6NHZ5 514 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 K7ERQ8 282 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 MUSKO15146 869 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 LYPLA1O75608 230 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 UBXN7O94888 489 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 USP53Q70EK8 1073 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms