RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 VWFP04275 2813 aa10.76□□□□□ -0.69
ATXN3-201ENST00000340660 CXorf51AA0A1B0GTR3 108 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 A0A1W2PPR1 153 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 A8MX80 341 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 GSTP1P09211 210 aaKnown RBP10.75□□□□□ -0.69
ATXN3-201ENST00000340660 SLC2A4P14672 509 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 DAZAP2Q15038 168 aaPredicted RBP10.75□□□□□ -0.69
ATXN3-201ENST00000340660 FAM174BQ3ZCQ3 159 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 STXBP4Q6ZWJ1 553 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 CHST15Q7LFX5 561 aaPredicted RBP10.75□□□□□ -0.69
ATXN3-201ENST00000340660 SIAH3Q8IW03 269 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 NELFCDQ8IXH7 590 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 C12orf56Q8IXR9 622 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 LZTR1Q8N653 840 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 AVL9Q8NBF6 648 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 OR1L3Q8NH93 324 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 ZNF507Q8TCN5 953 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 RND1Q92730 232 aa10.75□□□□□ -0.69
ATXN3-201ENST00000340660 SAMSN1Q9NSI8 373 aaKnown RBP10.75□□□□□ -0.69
ATXN3-201ENST00000340660 SEPT11Q9NVA2 429 aaKnown RBP10.75□□□□□ -0.69
ATXN3-201ENST00000340660 ZNF624Q9P2J8 865 aaPredicted RBP10.75□□□□□ -0.69
ATXN3-201ENST00000340660 NOCTQ9UK39 431 aaKnown RBP10.75□□□□□ -0.69
ATXN3-201ENST00000340660 MBD3L4A6NDZ8 208 aaPredicted RBP10.74□□□□□ -0.69
ATXN3-201ENST00000340660 MBD3L5A6NJ08 208 aaPredicted RBP10.74□□□□□ -0.69
ATXN3-201ENST00000340660 OR5K4A6NMS3 321 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 TLX2O43763 284 aaPredicted RBP10.74□□□□□ -0.69
ATXN3-201ENST00000340660 MTA2O94776 668 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 TMCC1O94876 653 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 RHOBTB3O94955 611 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 IGSF6O95976 241 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 XRCC1P18887 633 aaPredicted RBP10.74□□□□□ -0.69
ATXN3-201ENST00000340660 AGXTP21549 392 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 FLYWCH1Q4VC44 716 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 MIDNQ504T8 468 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 OTUD1Q5VV17 481 aaPredicted RBP10.74□□□□□ -0.69
ATXN3-201ENST00000340660 FBXW10Q5XX13 1052 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 LCLAT1Q6UWP7 414 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 C12orf54Q6X4T0 127 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 DPPA4Q7L190 304 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 TFAP2BQ92481 460 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 SNX21Q969T3 373 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 HSFY1Q96LI6 401 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 FANCD2OSQ96PS1 177 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 ZSWIM1Q9BR11 485 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 POPDC2Q9HBU9 364 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 GPATCH2LQ9NWQ4 482 aa10.74□□□□□ -0.69
ATXN3-201ENST00000340660 IGLV3-10A0A075B6K4 115 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 GOLGA6CA6NDK9 693 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 GOLGA6BA6NDN3 693 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 ASNA1O43681 348 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 PRAMEF1O95521 474 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 SOD1P00441 154 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 VIPP01282 170 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 GOLGA6DP0CG33 693 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 CBSLP0DN79 551 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 ACP5P13686 325 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 CBSP35520 551 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 ID3Q02535 119 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 GPR18Q14330 331 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 CAPRIN1Q14444 709 aaKnown RBP10.73□□□□□ -0.69
ATXN3-201ENST00000340660 AGAP9Q5VTM2 703 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 RAET1GQ6H3X3 334 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 TMEM211Q6ICI0 200 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 TIGD7Q6NT04 549 aaPredicted RBP10.73□□□□□ -0.69
ATXN3-201ENST00000340660 BRAT1Q6PJG6 821 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 KIRREL2Q6UWL6 708 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 SV2BQ7L1I2 683 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 TTC39CQ8N584 583 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 FAM222BQ8WU58 562 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 PSMF1Q92530 271 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 PERPQ96FX8 193 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 EXOC2Q96KP1 924 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 PIP5K1AQ99755 562 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 TLR10Q9BXR5 811 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 GOLGA6AQ9NYA3 693 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 PTGFRNQ9P2B2 879 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 DCTN4Q9UJW0 460 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 CDYLQ9Y232 598 aa10.73□□□□□ -0.69
ATXN3-201ENST00000340660 SLC9B1P1A6NJY1 282 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 MAPK13O15264 365 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 CD5LO43866 347 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 DNAJB6O75190 326 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 WDPCPO95876 746 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 CYP2A7P20853 494 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 MMP11P24347 488 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 TEAD1P28347 426 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 ARSEP51690 589 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 GEMIN4P57678 1058 aaKnown RBP10.72□□□□□ -0.69
ATXN3-201ENST00000340660 SNRPFP62306 86 aaKnown RBP10.72□□□□□ -0.69
ATXN3-201ENST00000340660 ALDH6A1Q02252 535 aaKnown RBP10.72□□□□□ -0.69
ATXN3-201ENST00000340660 SLC9A5Q14940 896 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 TAF5Q15542 800 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 FILIP1LQ4L180 1135 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 MEX3DQ86XN8 651 aaKnown RBP10.72□□□□□ -0.69
ATXN3-201ENST00000340660 DRC7Q8IY82 874 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 PLD6Q8N2A8 252 aaKnown RBP10.72□□□□□ -0.69
ATXN3-201ENST00000340660 GHDCQ8N2G8 530 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 ZMYND19Q96E35 227 aaPredicted RBP10.72□□□□□ -0.69
ATXN3-201ENST00000340660 NCAPGQ9BPX3 1015 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 NOL6Q9H6R4 1146 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms