RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 CTSCP53634 463 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 CDC16Q13042 620 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 C2orf27AQ580R0 203 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 WLSQ5T9L3 541 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 PPP2R2DQ66LE6 453 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 SBSNQ6UWP8 590 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 RAVER1Q8IY67 606 aaKnown RBP9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 SYTL1Q8IYJ3 562 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 FGF13Q92913 245 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 TMEM159Q96B96 161 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 CEP295NLQ96MC4 621 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 SPAG4Q9NPE6 437 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 TBC1D14Q9P2M4 693 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 TMEM98Q9Y2Y6 226 aa9.99□□□□□ -0.81
RBFOX1-202ENST00000340209 SOCS5O75159 536 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 STK16O75716 305 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 SEC24DO94855 1032 aaPredicted RBP9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 ANXA5P08758 320 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 SPINT3P49223 89 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 SFT2D3Q587I9 215 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 FAM78AQ5JUQ0 283 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 TMEM220Q6QAJ8 160 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 CPXM2Q8N436 756 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 RHEBL1Q8TAI7 183 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 ARMC5Q96C12 935 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 THUMPD3Q9BV44 507 aaKnown RBP9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 YIPF3Q9GZM5 350 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 MCOLN1Q9GZU1 580 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 ZDHHC3Q9NYG2 299 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 THEGQ9P2T0 379 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 PLAGL1Q9UM63 463 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 HEPACAM2A8MVW5 462 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 K7ESM1 405 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 E2F3O00716 465 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 ULK1O75385 1050 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 CSRP3P50461 194 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 CASP9P55211 416 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 SHHQ15465 462 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 MTX3Q5HYI7 312 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 ERAP2Q6P179 960 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 LARP4Q71RC2 724 aaKnown RBP eCLIP9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 AHI1Q8N157 1196 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 PELI3Q8N2H9 469 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 KRTCAP2Q8N6L1 136 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 SPDYE1Q8NFV5 336 aaPredicted RBP9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 PEX13Q92968 403 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 NKX2-4Q9H2Z4 354 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 INTS7Q9NVH2 962 aaKnown RBP9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 STK39Q9UEW8 545 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 VCANP13611 3396 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 HTRA2O43464 458 aaPredicted RBP9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 ADH1CP00326 375 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 UROSP10746 265 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 GPR1P46091 355 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 HTRA4P83105 476 aaPredicted RBP9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 MEF2AQ02078 507 aaPredicted RBP9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 PPP1R8Q12972 351 aaKnown RBP9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 NAE1Q13564 534 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 PTCHD3Q3KNS1 767 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 CCSMST1Q4G0I0 132 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 PARS2Q7L3T8 475 aaKnown RBP9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 FUNDC1Q8IVP5 155 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 CFAP206Q8IYR0 622 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 LRTOMTQ8WZ04 291 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 SUSD6Q92537 303 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 CLP1Q92989 425 aaKnown RBP9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 APOLD1Q96LR9 279 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 PBX4Q9BYU1 374 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 C1orf21Q9H246 121 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 NUDT4Q9NZJ9 180 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 STOML2Q9UJZ1 356 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 WDR87Q6ZQQ6 2873 aa9.98□□□□□ -0.81
RBFOX1-202ENST00000340209 SAP18O00422 153 aaKnown RBP9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 FKBP6O75344 327 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 SLC22A3O75751 556 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 LATS1O95835 1130 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 B3GALT4O96024 378 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 STATHP02808 62 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 GBAP04062 536 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 RPS17P08708 135 aaKnown RBP9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 CYP2A6P11509 494 aaPredicted RBP9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 KLC1Q07866 573 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 SLC14A2Q15849 920 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 RFTN2Q52LD8 501 aaPredicted RBP9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 C1orf53Q5VUE5 145 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 ENDOVQ8N8Q3 282 aaKnown RBP9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 BPIFB1Q8TDL5 484 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 AURKBQ96GD4 344 aaPredicted RBP9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 KCTD5Q9NXV2 234 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 HS3ST2Q9Y278 367 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 TRIM38O00635 465 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 PCCBP05166 539 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 ATP1B2P14415 290 aaPredicted RBP9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 B4GALNT1Q00973 533 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 PAGE3Q5JUK9 113 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 C6orf136Q5SQH8 315 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 KANK2Q63ZY3 851 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 FAM91A1Q658Y4 838 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 SFRP1Q8N474 314 aa9.97□□□□□ -0.81
RBFOX1-202ENST00000340209 PNPT1Q8TCS8 783 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms