RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 LEMD2Q8NC56 503 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 METTL6Q8TCB7 284 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 GAD1Q99259 594 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 CGREF1Q99674 301 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 GPR21Q99679 349 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 ARPC5LQ9BPX5 153 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 ASPSCR1Q9BZE9 553 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 VAPAQ9P0L0 249 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 FBXO10Q9UK96 956 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 ORC6Q9Y5N6 252 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 CCNYL3P0C7X3 344 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 ATF4P18848 351 aaPredicted RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 HTR1EP28566 365 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 GJA5P36382 358 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 SERPINB10P48595 397 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 TRPC1P48995 793 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 NEK2P51955 445 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 AIF1P55008 147 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 COPZ1P61923 177 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 EMX2Q04743 252 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 SLC9A5Q14940 896 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 ALKAL1Q6UXT8 129 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 SPATC1Q76KD6 591 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 BPHLQ86WA6 291 aaPredicted RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 ZNF540Q8NDQ6 660 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 MCFD2Q8NI22 146 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 PTCD2Q8WV60 388 aaKnown RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 FAR1Q8WVX9 515 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 TMEM209Q96SK2 561 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 ATOH8Q96SQ7 321 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 BARD1Q99728 777 aaKnown RBP7.77□□□□□ -1.17
VMA21-201ENST00000330374 PRR14Q9BWN1 585 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 IKZF5Q9H5V7 419 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 ZNF225Q9UK10 706 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 VPS4AQ9UN37 437 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 ACTL7AQ9Y615 435 aa7.77□□□□□ -1.17
VMA21-201ENST00000330374 A8MV72 311 aaPredicted RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 PRMT5O14744 637 aaPredicted RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 ZNF682O95780 498 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 CHRNA1P02708 482 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 FGF4P08620 206 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 ENO2P09104 434 aaPredicted RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 SLC2A4P14672 509 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 ALOX12P18054 663 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 CRY1Q16526 586 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 AGAP7PQ5VUJ5 663 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 IRAK1BP1Q5VVH5 260 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 KDELC1Q6UW63 502 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 SLC22A15Q8IZD6 547 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 TTC30BQ8N4P2 665 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 FAM83FQ8NEG4 500 aaPredicted RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 STAG3L4Q8TBR4 150 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 EXOC2Q96KP1 924 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 RBCK1Q9BYM8 510 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 TSPAN10Q9H1Z9 355 aaPredicted RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 DDX28Q9NUL7 540 aaKnown RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 ERVK-11Q9UQG0 969 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 DOCK1Q14185 1865 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 LOC100506127A0A0U1RQW1 187 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 E9PAM4 449 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 GUCA1CO95843 209 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 MT-ND2P03891 347 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 LCKP06239 509 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 SPNP16150 400 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 ZFP36L2P47974 494 aaKnown RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 FOXM1Q08050 763 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 ARSIQ5FYB1 569 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 MRNIPQ6NTE8 343 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 ANKRD46Q86W74 232 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 MFSD4AQ8N468 514 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 TOP6BLQ8N6T0 577 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 PAPD5Q8NDF8 572 aaKnown RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 S100ZQ8WXG8 99 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 ZHX1-C8orf76Q96EF9 292 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 SEMA3CQ99985 751 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 SLC25A51Q9H1U9 297 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 TP63Q9H3D4 680 aaPredicted RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 C8orf4Q9NR00 106 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 PIM2Q9P1W9 311 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 BRCA2P51587 3418 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 IQCF5A8MTL0 148 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 NFKBIEO00221 500 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 MEN1O00255 615 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 SLC7A4O43246 635 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 PRSS23O95084 383 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 MFN2O95140 757 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 CAPN1P07384 714 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 ALOX5P09917 674 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 DARSP14868 501 aaKnown RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 FDXRP22570 491 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 CD40LGP29965 261 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 RPL38P63173 70 aaKnown RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 TIAL1Q01085 375 aaKnown RBP eCLIP7.76□□□□□ -1.17
VMA21-201ENST00000330374 RSBN1Q5VWQ0 802 aaPredicted RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 GPRIN3Q6ZVF9 776 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 AHSA2Q719I0 299 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 ARMC8Q8IUR7 673 aa7.76□□□□□ -1.17
VMA21-201ENST00000330374 APOBEC3FQ8IUX4 373 aaKnown RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 SIDT2Q8NBJ9 832 aaKnown RBP7.76□□□□□ -1.17
VMA21-201ENST00000330374 C3orf58Q8NDZ4 430 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms