RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 KATNAL2Q8IYT4 538 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 DSELQ8IZU8 1212 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 ANP32BQ92688 251 aaKnown RBP13.85□□□□□ -0.19
RPP40-201ENST00000319533 MR1Q95460 341 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 C12orf66Q96MD2 445 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 CHST8Q9H2A9 424 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 GOLPH3Q9H4A6 298 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 SYTL2Q9HCH5 934 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 ACSS2Q9NR19 701 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 KLHL8Q9P2G9 620 aaPredicted RBP13.85□□□□□ -0.19
RPP40-201ENST00000319533 CFAP20Q9Y6A4 193 aaKnown RBP13.85□□□□□ -0.19
RPP40-201ENST00000319533 PRRC2CQ9Y520 2896 aaKnown RBP13.84□□□□□ -0.19
RPP40-201ENST00000319533 OR6C74A6NCV1 312 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 ARGFXA6NJG6 315 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 BTNL10A8MVZ5 291 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 HACD1B0YJ81 288 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 MEN1O00255 615 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 MATN2O00339 956 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 BUD23O43709 281 aaKnown RBP13.84□□□□□ -0.19
RPP40-201ENST00000319533 ZRANB2O95218 330 aaKnown RBP eCLIP13.84□□□□□ -0.19
RPP40-201ENST00000319533 KLK3P07288 261 aaPredicted RBP13.84□□□□□ -0.19
RPP40-201ENST00000319533 CAPN1P07384 714 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 NDUFS1P28331 727 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 PTGIRP43119 386 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 TNNT3P45378 269 aaPredicted RBP13.84□□□□□ -0.19
RPP40-201ENST00000319533 CCL11P51671 97 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 VAV2P52735 878 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 CHAF1BQ13112 559 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 ZNF789Q5FWF6 425 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 LCN10Q6JVE6 187 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 DUS1LQ6P1R4 473 aaKnown RBP13.84□□□□□ -0.19
RPP40-201ENST00000319533 SPOCD1Q6ZMY3 1216 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 PID1Q7Z2X4 250 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 RCOR2Q8IZ40 523 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 ACRBPQ8NEB7 543 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 IPMKQ8NFU5 416 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 P3H4Q92791 437 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 RBM41Q96IZ5 413 aaKnown RBP13.84□□□□□ -0.19
RPP40-201ENST00000319533 PPM1MQ96MI6 270 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 QKIQ96PU8 341 aaKnown RBP eCLIP13.84□□□□□ -0.19
RPP40-201ENST00000319533 C19orf43Q9BQ61 176 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 NLNQ9BYT8 704 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 C1GALT1Q9NS00 363 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 PLEKHB1Q9UF11 243 aaPredicted RBP13.84□□□□□ -0.19
RPP40-201ENST00000319533 TRHDEQ9UKU6 1024 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 POMT2Q9UKY4 750 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 ZNF451Q9Y4E5 1061 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 COLEC10Q9Y6Z7 277 aa13.84□□□□□ -0.19
RPP40-201ENST00000319533 hCG_1818297A0A087WSY0 165 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 RCCD1A6NED2 376 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 STX7O15400 261 aaKnown RBP13.83□□□□□ -0.2
RPP40-201ENST00000319533 AGFG2O95081 481 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 PRAMEF1O95521 474 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 SLC35G4P0C7Q5 338 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 PBLDP30039 288 aaPredicted RBP13.83□□□□□ -0.2
RPP40-201ENST00000319533 AKT1P31749 480 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 XIAPP98170 497 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 ABRQ12979 859 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 PTPRCAPQ14761 206 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 TAF1AQ15573 450 aaPredicted RBP13.83□□□□□ -0.2
RPP40-201ENST00000319533 TFDP3Q5H9I0 405 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 KAZNQ674X7 775 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 ARMC6Q6NXE6 501 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 FBXO38Q6PIJ6 1188 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 RANBP10Q6VN20 620 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 DET1Q7L5Y6 550 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 ENDOVQ8N8Q3 282 aaKnown RBP13.83□□□□□ -0.2
RPP40-201ENST00000319533 Q8NA96 180 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 GLIS1Q8NBF1 620 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 CPT1BQ92523 772 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 RMDN2Q96LZ7 410 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 GORASP1Q9BQQ3 440 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 CCM2Q9BSQ5 444 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 PCMTD2Q9NV79 361 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 CUEDC1Q9NWM3 386 aaPredicted RBP13.83□□□□□ -0.2
RPP40-201ENST00000319533 TCFL5Q9UL49 500 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 REXO2Q9Y3B8 237 aaKnown RBP13.83□□□□□ -0.2
RPP40-201ENST00000319533 HEBP2Q9Y5Z4 205 aa13.83□□□□□ -0.2
RPP40-201ENST00000319533 SPTBP11277 2137 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 ESPL1Q14674 2120 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 SEC16AO15027 2179 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 C17orf113A0A1B0GUU1 675 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 C5orf60A6NFR6 353 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 SLC9B1P1A6NJY1 282 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 C2orf81A6NN90 581 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 PJA2O43164 708 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 SRP72O76094 671 aaKnown RBP13.82□□□□□ -0.2
RPP40-201ENST00000319533 TMEM63AO94886 807 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 AGTP01019 485 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 POLR2CP19387 275 aaPredicted RBP13.82□□□□□ -0.2
RPP40-201ENST00000319533 CTNNA1P35221 906 aaKnown RBP13.82□□□□□ -0.2
RPP40-201ENST00000319533 ADRA1AP35348 466 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 PRLHRP49683 370 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 KIF5AQ12840 1032 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 MSLNQ13421 630 aaPredicted RBP13.82□□□□□ -0.2
RPP40-201ENST00000319533 INPP5JQ15735 1006 aaPredicted RBP13.82□□□□□ -0.2
RPP40-201ENST00000319533 ZNF658BQ4V348 819 aaPredicted RBP13.82□□□□□ -0.2
RPP40-201ENST00000319533 PRAMEF17Q5VTA0 474 aa13.82□□□□□ -0.2
RPP40-201ENST00000319533 JMJD6Q6NYC1 403 aaPredicted RBP13.82□□□□□ -0.2
RPP40-201ENST00000319533 FAM198BQ6UWH4 519 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms