RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 PIM3Q86V86 326 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 IGDCC3Q8IVU1 814 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KRT222Q8N1A0 295 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 C2CD4AQ8NCU7 369 aaPredicted RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 LKAAEAR1Q8TD35 194 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SKA2Q8WVK7 121 aaPredicted RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 IFT81Q8WYA0 676 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CDKL2Q92772 493 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 WDR83Q9BRX9 315 aaKnown RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 STRADBQ9C0K7 418 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TSPYL1Q9H0U9 437 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 OR52A5Q9H2C5 316 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NSMCE4AQ9NXX6 385 aa10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ZNF624Q9P2J8 865 aaPredicted RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ATXN7L1Q9ULK2 861 aaPredicted RBP10.75□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 A0A1W2PQM1 296 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SLC5A10A0PJK1 596 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TMX2-CTNND1H3BSU7 103 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NIPSNAP2O75323 286 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 VPS26AO75436 327 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 UBXN7O94888 489 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 S1PR4O95977 384 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 RPN2P04844 631 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 GSTA2P09210 222 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 AOAHP28039 575 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CCR7P32248 378 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 MGAT5Q09328 741 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TARDBPQ13148 414 aaKnown RBP eCLIP10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 GPR18Q14330 331 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FRG1Q14331 258 aaKnown RBP10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PLEKHS1Q5SXH7 462 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PHF19Q5T6S3 580 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CAPRIN2Q6IMN6 1127 aaKnown RBP10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 UGT3A1Q6NUS8 523 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KLHL35Q6PF15 583 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ZDHHC24Q6UX98 284 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NAPRTQ6XQN6 538 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 GALNT7Q86SF2 657 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CNTN4Q8IWV2 1026 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 UNC5BQ8IZJ1 945 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CACTIN-AS1Q8N1I8 211 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 DCBLD1Q8N8Z6 715 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SPDYE1Q8NFV5 336 aaPredicted RBP10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ZFPM2Q8WW38 1151 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SEC14L1Q92503 715 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NCSTNQ92542 709 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TFGQ92734 400 aaPredicted RBP10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 GRAMD1AQ96CP6 724 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FOPNLQ96NB1 174 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 BIRC8Q96P09 236 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FERD3LQ96RJ6 166 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 INSM2Q96T92 566 aaPredicted RBP10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FMO2Q99518 471 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TBC1D10AQ9BXI6 508 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 MVB12BQ9H7P6 319 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SLC40A1Q9NP59 571 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 AKAP7Q9P0M2 348 aaPredicted RBP10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TXNDC16Q9P2K2 825 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 DMGDHQ9UI17 866 aaKnown RBP10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CORO1CQ9ULV4 474 aaPredicted RBP10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ASF1AQ9Y294 204 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 MSRB2Q9Y3D2 182 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 BPTFQ12830 3046 aa10.74□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ANKRD12Q6UB98 2062 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 WDR87Q6ZQQ6 2873 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SPTBN2O15020 2390 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 B4GAT1O43505 415 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SPAG6O75602 509 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PROS1P07225 676 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 F7P08709 466 aaPredicted RBP10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 RHOXF2BP0C7M4 288 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TYRP1P17643 537 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PDHA2P29803 388 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 STX2P32856 288 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 MAGEA4P43358 317 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 LEPRP48357 1165 aaKnown RBP10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CBLBQ13191 982 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CUL1Q13616 776 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TRADDQ15628 312 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ISXQ2M1V0 245 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ZNF658BQ4V348 819 aaPredicted RBP10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ZNF789Q5FWF6 425 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TEX35Q5T0J7 233 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NKAIN2Q5VXU1 208 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ARMC6Q6NXE6 501 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TRMT10BQ6PF06 316 aaKnown RBP10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CNSTQ6PJW8 725 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CCNI2Q6ZMN8 369 aaPredicted RBP10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SLC26A11Q86WA9 606 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 OOSP2Q86WS3 158 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PLXDC1Q8IUK5 500 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 IFT20Q8IY31 132 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SLC22A15Q8IZD6 547 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ZBTB2Q8N680 514 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ACVR1CQ8NER5 493 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KCNJ9Q92806 393 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FAM136AQ96C01 138 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NXPE2Q96DL1 559 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 C9orf72Q96LT7 481 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 RHOXF2Q9BQY4 288 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms