RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 C6orf52Q5T4I8 152 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 RTL4Q6ZR62 310 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 PEG10Q86TG7 708 aaKnown RBP15.71■□□□□ 0.11
USP42-201ENST00000306177 PARP8Q8N3A8 854 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 CBR4Q8N4T8 237 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 OR10A6Q8NH74 314 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 FAM81AQ8TBF8 368 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 ZNF514Q96K75 400 aaPredicted RBP15.71■□□□□ 0.11
USP42-201ENST00000306177 EXO5Q9H790 373 aa15.71■□□□□ 0.11
USP42-201ENST00000306177 CCDC182A6NF36 153 aa15.71■□□□□ 0.1
USP42-201ENST00000306177 PI15O43692 258 aa15.71■□□□□ 0.1
USP42-201ENST00000306177 INCA1Q0VD86 236 aa15.71■□□□□ 0.1
USP42-201ENST00000306177 ZNF155Q12901 538 aaPredicted RBP15.71■□□□□ 0.1
USP42-201ENST00000306177 DCST1Q5T197 706 aa15.71■□□□□ 0.1
USP42-201ENST00000306177 CHST15Q7LFX5 561 aaPredicted RBP15.71■□□□□ 0.1
USP42-201ENST00000306177 ANKRD46Q86W74 232 aa15.71■□□□□ 0.1
USP42-201ENST00000306177 LMLNQ96KR4 655 aa15.71■□□□□ 0.1
USP42-201ENST00000306177 GINS4Q9BRT9 223 aa15.71■□□□□ 0.1
USP42-201ENST00000306177 SUV39H2Q9H5I1 410 aa15.71■□□□□ 0.1
USP42-201ENST00000306177 CCSER2Q9H7U1 834 aa15.71■□□□□ 0.1
USP42-201ENST00000306177 SCML2Q9UQR0 700 aa15.71■□□□□ 0.1
USP42-201ENST00000306177 FAM159BA6NKW6 160 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 RGS10O43665 173 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 WDR4P57081 412 aaKnown RBP15.7■□□□□ 0.1
USP42-201ENST00000306177 RGS8P57771 180 aaPredicted RBP15.7■□□□□ 0.1
USP42-201ENST00000306177 STXBP1P61764 594 aaKnown RBP15.7■□□□□ 0.1
USP42-201ENST00000306177 TEAD4Q15561 434 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 SLC9A4Q6AI14 798 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 HFE2Q6ZVN8 426 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 GAS2L1Q99501 681 aaPredicted RBP15.7■□□□□ 0.1
USP42-201ENST00000306177 SIX4Q9UIU6 781 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 HS3ST4Q9Y661 456 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 BAZ2AQ9UIF9 1905 aaKnown RBP15.7■□□□□ 0.1
USP42-201ENST00000306177 CLDN4O14493 209 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 NADKO95544 446 aaPredicted RBP15.7■□□□□ 0.1
USP42-201ENST00000306177 CCND3P30281 292 aaPredicted RBP15.7■□□□□ 0.1
USP42-201ENST00000306177 PTPN5P54829 565 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 SEC13P55735 322 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 RPTNQ6XPR3 784 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 CEP68Q76N32 757 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 TMC8Q8IU68 726 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 DNAJB8Q8NHS0 232 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 RNASE11Q8TAA1 199 aaKnown RBP15.7■□□□□ 0.1
USP42-201ENST00000306177 C10orf82Q8WW14 230 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 GKN1Q9NS71 199 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 TMEM59LQ9UK28 342 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 STON1Q9Y6Q2 735 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 RGPD2P0DJD1 1756 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 OR51F1A6NGY5 319 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 SERPINA1P01009 418 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 SAGP10523 405 aaPredicted RBP15.7■□□□□ 0.1
USP42-201ENST00000306177 HNMTP50135 292 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 PRR5P85299 388 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 ECT2LQ008S8 904 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 OGDHQ02218 1023 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 SNAPC1Q16533 368 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 DPY19L1Q2PZI1 675 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 FAM174BQ3ZCQ3 159 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 CYP2U1Q7Z449 544 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 SVOPLQ8N434 492 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 FLCNQ8NFG4 579 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 C8orf48Q96LL4 319 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 ABCG4Q9H172 646 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 RAPGEFL1Q9UHV5 662 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 PSMD11O00231 422 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 PLK4O00444 970 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 CDH3P22223 829 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 DLG1Q12959 904 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 SIRPB2Q5JXA9 342 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 SWT1Q5T5J6 900 aaKnown RBP15.7■□□□□ 0.1
USP42-201ENST00000306177 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.7■□□□□ 0.1
USP42-201ENST00000306177 HM13Q8TCT9 377 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 LRTOMTQ8WZ04 291 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 SLC38A4Q969I6 547 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 TRIM8Q9BZR9 551 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 NECTIN3Q9NQS3 549 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 CALML5Q9NZT1 146 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 SLC17A6Q9P2U8 582 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 NUP188Q5SRE5 1749 aa15.7■□□□□ 0.1
USP42-201ENST00000306177 AOC2O75106 756 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 NRLP54845 237 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 PRKD1Q15139 912 aaPredicted RBP15.69■□□□□ 0.1
USP42-201ENST00000306177 QPRTQ15274 297 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 PAQR3Q6TCH7 311 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 OAFQ86UD1 273 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 OSTM1Q86WC4 334 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 ZC3H3Q8IXZ2 948 aaKnown RBP15.69■□□□□ 0.1
USP42-201ENST00000306177 CDKN2AIPNLQ96HQ2 116 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 PCYT2Q99447 389 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 OR2AG1Q9H205 316 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 FBXW2Q9UKT8 454 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 FAM234BA2RU67 622 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 HCRTO43612 131 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 PAFAH1B3Q15102 231 aaKnown RBP15.69■□□□□ 0.1
USP42-201ENST00000306177 FAM129CQ86XR2 697 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.69■□□□□ 0.1
USP42-201ENST00000306177 ZNF354BQ96LW1 612 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 CXCR6O00574 342 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 ETS2P15036 469 aa15.69■□□□□ 0.1
USP42-201ENST00000306177 ITGAXP20702 1163 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms