RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 HSFX1Q9UBD0 423 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 H3BNH8 94 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 K7EPI3 171 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 FZD6O60353 706 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 PARNO95453 639 aaKnown RBP13.38□□□□□ -0.27
CDH8-201ENST00000299345 ANXA6P08133 673 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 BPIP17213 487 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 VARSP26640 1264 aaKnown RBP13.38□□□□□ -0.27
CDH8-201ENST00000299345 IL12AP29459 219 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 OR4D2P58180 307 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 RAB33AQ14088 237 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 GPR141Q7Z602 305 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 TMCO2Q7Z6W1 182 aaPredicted RBP13.38□□□□□ -0.27
CDH8-201ENST00000299345 FAM162AQ96A26 154 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 TBCDQ9BTW9 1192 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 SLC2A11Q9BYW1 496 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 RNF208Q9H0X6 261 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 SMOXQ9NWM0 555 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 VWA8A3KMH1 1905 aa13.38□□□□□ -0.27
CDH8-201ENST00000299345 IFRD1O00458 451 aaPredicted RBP13.37□□□□□ -0.27
CDH8-201ENST00000299345 HTR1EP28566 365 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 RPS9P46781 194 aaKnown RBP13.37□□□□□ -0.27
CDH8-201ENST00000299345 TLE2Q04725 743 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 PHKG1Q16816 387 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 FAM174BQ3ZCQ3 159 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 STK32CQ86UX6 486 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 OR2AP1Q8NGE2 309 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 SLC13A3Q8WWT9 602 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 EID2BQ96D98 161 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 SH3GL1Q99961 368 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 HTATIP2Q9BUP3 242 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 CD244Q9BZW8 370 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 ELOVL6Q9H5J4 265 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 LRTM1Q9HBL6 345 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 ZNF334Q9HCZ1 680 aaPredicted RBP13.37□□□□□ -0.27
CDH8-201ENST00000299345 C8orf4Q9NR00 106 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 KCTD5Q9NXV2 234 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 SMPD3Q9NY59 655 aaPredicted RBP13.37□□□□□ -0.27
CDH8-201ENST00000299345 LIMD1Q9UGP4 676 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 OARD1Q9Y530 152 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 TET1Q8NFU7 2136 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 FKTNO75072 461 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 CAPNS1P04632 268 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 OR56A5P0C7T3 313 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 ACRV1P26436 265 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 RFC2P35250 354 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 LMAN2Q12907 356 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 PTGR1Q14914 329 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 BBS7Q8IWZ6 715 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 NXPE1Q8N323 547 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 OR2T12Q8NG77 320 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 CLHC1Q8NHS4 586 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 FBXO30Q8TB52 745 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 HM13Q8TCT9 377 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 TFAP2CQ92754 450 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 ZDHHC6Q9H6R6 413 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 HEBP1Q9NRV9 189 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 PRSS21Q9Y6M0 314 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 A0A1B0GTW7 788 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 PLOD2O00469 737 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 OR7A17O14581 309 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 SOCS5O75159 536 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 GJA1P17302 382 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 RPS3P23396 243 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDH8-201ENST00000299345 NSG1P42857 185 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 RPIAP49247 311 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 YBX1P67809 324 aaKnown RBP13.37□□□□□ -0.27
CDH8-201ENST00000299345 PWP1Q13610 501 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 BOP1Q14137 746 aaKnown RBP13.37□□□□□ -0.27
CDH8-201ENST00000299345 NHSL2Q5HYW2 709 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 IRAK1BP1Q5VVH5 260 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 DET1Q7L5Y6 550 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 OFCC1Q8IZS5 231 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 LKAAEAR1Q8TD35 194 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 RPF2Q9H7B2 306 aaKnown RBP13.37□□□□□ -0.27
CDH8-201ENST00000299345 RSL24D1Q9UHA3 163 aaKnown RBP13.37□□□□□ -0.27
CDH8-201ENST00000299345 USP22Q9UPT9 525 aa13.37□□□□□ -0.27
CDH8-201ENST00000299345 PRRC2BQ5JSZ5 2229 aaKnown RBP13.36□□□□□ -0.27
CDH8-201ENST00000299345 TRAV19A0A0A6YYK7 116 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 LOC730098B7Z3J9 87 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 NOL3O60936 208 aaKnown RBP13.36□□□□□ -0.27
CDH8-201ENST00000299345 E2F6O75461 281 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 GLUD1P00367 558 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 PSMA3P25788 255 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 PLEKHG6Q3KR16 790 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 FAM43BQ6ZT52 329 aaPredicted RBP13.36□□□□□ -0.27
CDH8-201ENST00000299345 EP400NLQ6ZTU2 488 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 TSPAN33Q86UF1 283 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 LIX1Q8N485 282 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 PDPRQ8NCN5 879 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 SELENOMQ8WWX9 145 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 NCSTNQ92542 709 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 PLXNA3P51805 1871 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 ASPDHA6ND91 283 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 LSM1O15116 133 aaKnown RBP13.36□□□□□ -0.27
CDH8-201ENST00000299345 VILLO15195 856 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 CLIC3O95833 236 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 GGT5P36269 586 aa13.36□□□□□ -0.27
CDH8-201ENST00000299345 ZIK1Q3SY52 487 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms