RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 OR8D1Q8WZ84 308 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 VPS35Q96QK1 796 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 PARVBQ9HBI1 364 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 AIG1Q9NVV5 245 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 OPTCQ9UBM4 332 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 MSRAQ9UJ68 235 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 NDUFAF1Q9Y375 327 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 H0Y858 1186 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 GFYI3L273 518 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 RFXAPO00287 272 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 WNT9AO14904 365 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 STK16O75716 305 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 BAG2O95816 211 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 ENO2P09104 434 aaPredicted RBP9.4□□□□□ -0.9
TRIM55-201ENST00000276573 XRCC1P18887 633 aaPredicted RBP9.4□□□□□ -0.9
TRIM55-201ENST00000276573 ITGB7P26010 798 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 ARL1P40616 181 aaPredicted RBP9.4□□□□□ -0.9
TRIM55-201ENST00000276573 OPRD1P41143 372 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 PSMD8P48556 350 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 METAP1P53582 386 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 DIO3P55073 304 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 NME5P56597 212 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 MS4A2Q01362 244 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 RUNX3Q13761 415 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 C6orf136Q5SQH8 315 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 LDLRAP1Q5SW96 308 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 PPP2R2DQ66LE6 453 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 C8orf82Q6P1X6 216 aaPredicted RBP9.4□□□□□ -0.9
TRIM55-201ENST00000276573 SYCE2Q6PIF2 218 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 IL27RAQ6UWB1 636 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 NEK10Q6ZWH5 1172 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 KBTBD6Q86V97 674 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 SFRP1Q8N474 314 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 SLC26A7Q8TE54 656 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 TSPEARQ8WU66 669 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 GLYATL1Q969I3 302 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 AP2M1Q96CW1 435 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 COQ10AQ96MF6 247 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 NTMT1Q9BV86 223 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 TRIM54Q9BYV2 358 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 PLA2G2FQ9BZM2 168 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 TMEM245Q9H330 911 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 CROTQ9UKG9 612 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 CDH7Q9ULB5 785 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 ITM2BQ9Y287 266 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 C2orf16Q68DN1 1984 aa9.4□□□□□ -0.9
TRIM55-201ENST00000276573 ATG2AQ2TAZ0 1938 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 PIKFYVEQ9Y2I7 2098 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 TBC1D3BA6NDS4 549 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 BBIP1A8MTZ0 92 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 E7ENX8 843 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 QSOX1O00391 747 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 TRIM38O00635 465 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 LINC01565O15544 149 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 SPINT1O43278 529 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 SYNCRIPO60506 623 aaKnown RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 FTH1P02794 183 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 HIST1H2AGP0C0S8 130 aaPredicted RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 EPB42P16452 691 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 HIST1H2ADP20671 130 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 HMOX2P30519 316 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 HTR6P50406 440 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ERVK-8P63133 956 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 CREB5Q02930 508 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 FCHO2Q0JRZ9 810 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 TMEM115Q12893 351 aaPredicted RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 BOP1Q14137 746 aaKnown RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 NAIF1Q69YI7 327 aaPredicted RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 TLDC1Q6P9B6 456 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 FBXL19Q6PCT2 694 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 BLOC1S3Q6QNY0 202 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 MBOAT1Q6ZNC8 495 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 RASGRP3Q8IV61 690 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 TCAIMQ8N3R3 496 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 CPA6Q8N4T0 437 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 RNF148Q8N7C7 305 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 RASGEF1AQ8N9B8 481 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 TERB1Q8NA31 727 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 PCYOX1LQ8NBM8 494 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ASZ1Q8WWH4 475 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 PYDC1Q8WXC3 89 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ELMO1Q92556 727 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 MRPL38Q96DV4 380 aaKnown RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 HIST1H2AHQ96KK5 128 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 HIST1H2AJQ99878 128 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 H2AFJQ9BTM1 129 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 WRAP53Q9BUR4 548 aaKnown RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 BRINP2Q9C0B6 783 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 SLC32A1Q9H598 525 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 SLC52A3Q9NQ40 469 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 MRPL40Q9NQ50 206 aaKnown RBP9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ARL15Q9NXU5 204 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ADA2Q9NZK5 511 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 MAP10Q9P2G4 905 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 CHD9Q3L8U1 2897 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 ANKRD12Q6UB98 2062 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 OR2AG2A6NM03 316 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 LOC730098B7Z3J9 87 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 NR5A2O00482 541 aa9.39□□□□□ -0.91
TRIM55-201ENST00000276573 AREL1O15033 823 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms