RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 PFDN6O15212 129 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 UGT2B11O75310 529 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 DEAF1O75398 565 aaPredicted RBP10.18□□□□□ -0.78
UPF3B-201ENST00000276201 FGF19O95750 216 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 ENO2P09104 434 aaPredicted RBP10.18□□□□□ -0.78
UPF3B-201ENST00000276201 THRBP10828 461 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 TGM1P22735 817 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 HOXC13P31276 330 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 EIF2B2P49770 351 aaKnown RBP10.18□□□□□ -0.78
UPF3B-201ENST00000276201 SUOXP51687 545 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 ARSFP54793 590 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 DAOAP59103 153 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 ZXDAP98168 799 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 EMX2Q04743 252 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 IL18R1Q13478 541 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 ACOX1Q15067 660 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 TAF12Q16514 161 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 RAB41Q5JT25 222 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 SYPL2Q5VXT5 272 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 ZNF470Q6ECI4 717 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 SLC16A12Q6ZSM3 486 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 LACC1Q8IV20 430 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 SCML4Q8N228 414 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 DPP10Q8N608 796 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 NETO2Q8NC67 525 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 OR52E4Q8NGH9 312 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 RHEBL1Q8TAI7 183 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 CHAC2Q8WUX2 184 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 FGF14Q92915 247 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 ISG20Q96AZ6 181 aaKnown RBP10.18□□□□□ -0.78
UPF3B-201ENST00000276201 FBXL8Q96CD0 374 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 TRMT2BQ96GJ1 504 aaKnown RBP10.18□□□□□ -0.78
UPF3B-201ENST00000276201 KCTD14Q9BQ13 255 aaPredicted RBP10.18□□□□□ -0.78
UPF3B-201ENST00000276201 SLC39A3Q9BRY0 314 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 MED10Q9BTT4 135 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 CNGB3Q9NQW8 809 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 ANKMY1Q9P2S6 941 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 MAGEL2Q9UJ55 1249 aa10.18□□□□□ -0.78
UPF3B-201ENST00000276201 LEF1Q9UJU2 399 aaPredicted RBP10.18□□□□□ -0.78
UPF3B-201ENST00000276201 IFRD1O00458 451 aaPredicted RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 SLC7A4O43246 635 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 MRPS14O60783 128 aaKnown RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 RSL1D1O76021 490 aaKnown RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 ALPLP05186 524 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 FCARP24071 287 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 IDUAP35475 653 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 GRK3P35626 688 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 OPRL1P41146 370 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 PLA2G16P53816 162 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 MLLT10P55197 1068 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 CYP4F8P98187 520 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 LIPEQ05469 1076 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 KIF19Q2TAC6 998 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 PITRM1Q5JRX3 1037 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 FAM78AQ5JUQ0 283 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 HECTD2Q5U5R9 776 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 BEND5Q7L4P6 421 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 PRSS48Q7RTY5 328 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 ISCA2Q86U28 154 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 OFCC1Q8IZS5 231 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 MAGEE2Q8TD90 523 aaPredicted RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 FBLIM1Q8WUP2 373 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 BIRC7Q96CA5 298 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 SMARCD1Q96GM5 515 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 CTRCQ99895 268 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 KXD1Q9BQD3 176 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 RPP25Q9BUL9 199 aaKnown RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 YIPF2Q9BWQ6 316 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 ATXN3LQ9H3M9 355 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 RMND5AQ9H871 391 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 NTN4Q9HB63 628 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 NECTIN3Q9NQS3 549 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 AIG1Q9NVV5 245 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 ZIM2Q9NZV7 527 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 DAPK2Q9UIK4 370 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 DNAJC15Q9Y5T4 150 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 PATJQ8NI35 1801 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 OBSL1O75147 1896 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 NYNRINQ9P2P1 1898 aaKnown RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 TRIOO75962 3097 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 C1orf232A0A0U1RR37 186 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 I6L893 689 aaPredicted RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 MATN3O15232 486 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 SLC22A1O15245 554 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 INPP4BO15327 924 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 SYNCRIPO60506 623 aaKnown RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 BCAS1O75363 584 aaPredicted RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 CDK14O94921 469 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 GABARAPO95166 117 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 F11P03951 625 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 ACVR2AP27037 513 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 SHMT2P34897 504 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 HPCAL1P37235 193 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 ZFP36L2P47974 494 aaKnown RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 TDGQ13569 410 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 RBM20Q5T481 1227 aaKnown RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 MTSS1LQ765P7 747 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 RAB44Q7Z6P3 723 aaPredicted RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 GALNT13Q8IUC8 556 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 C8orf59Q8N0T1 100 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms