RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CMPK1P30085 196 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 RING1Q06587 406 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 KHDRBS2Q5VWX1 349 aaKnown RBP15.18■□□□□ 0.02
TIMP3-201ENST00000266085 FBXO46Q6PJ61 603 aaPredicted RBP15.18■□□□□ 0.02
TIMP3-201ENST00000266085 FAM47BQ8NA70 645 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 C11orf65Q8NCR3 313 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 C1orf74Q96LT6 269 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 PRICKLE1Q96MT3 831 aaPredicted RBP15.18■□□□□ 0.02
TIMP3-201ENST00000266085 SERHL2Q9H4I8 314 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 SERHLQ9NQF3 203 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 SH3GLB1Q9Y371 365 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 G3V2T6 193 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 TEX28O15482 410 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 DNAJA2O60884 412 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 PLEKHG6Q3KR16 790 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 REP15Q6BDI9 236 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 GLB1L3Q8NCI6 653 aaPredicted RBP15.18■□□□□ 0.02
TIMP3-201ENST00000266085 OR7A2PQ8NGA2 310 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 MYDGFQ969H8 173 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 C12orf66Q96MD2 445 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 RSPH9Q9H1X1 276 aaPredicted RBP15.18■□□□□ 0.02
TIMP3-201ENST00000266085 ZC4H2Q9NQZ6 224 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 ATP6V1HQ9UI12 483 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 RUVBL1Q9Y265 456 aaKnown RBP15.18■□□□□ 0.02
TIMP3-201ENST00000266085 ERGIC3Q9Y282 383 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 NAV1Q8NEY1 1877 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 MYO7AQ13402 2215 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 C22orf39Q6P5X5 142 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 TPRG1Q6ZUI0 275 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 UBR7Q8N806 425 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 HMGB4Q8WW32 186 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 BADQ92934 168 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 GPR22Q99680 433 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 STMN3Q9NZ72 180 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 PAIP2BQ9ULR5 123 aaKnown RBP15.18■□□□□ 0.02
TIMP3-201ENST00000266085 FADS3Q9Y5Q0 445 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 OR1F1O43749 312 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 EDIL3O43854 480 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 OR6B1O95007 311 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 PRKCHP24723 683 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 RPS14P62263 151 aaKnown RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 TRIM25Q14258 630 aaKnown RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 NEK10Q6ZWH5 1172 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 RNF44Q7L0R7 432 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 SLC43A3Q8NBI5 491 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 EXOSC8Q96B26 276 aaKnown RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 NUS1Q96E22 293 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 EQTNQ9NQ60 294 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 C8orf4Q9NR00 106 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 EFCAB10A6NFE3 127 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 OAZ2O95190 189 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 EPOP01588 193 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 IL6P05231 212 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 ZNF37AP17032 561 aaPredicted RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 CDH3P22223 829 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 RPL4P36578 427 aaKnown RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 ACTR1BP42025 376 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 ACTR1AP61163 376 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 DPYSQ14117 519 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 HEPACAMQ14CZ8 416 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 PRKD1Q15139 912 aaPredicted RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 PDZK1Q5T2W1 519 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 RBM20Q5T481 1227 aaKnown RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 CST9Q5W186 159 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 LIX1Q8N485 282 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 C10orf82Q8WW14 230 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 OVCA2Q8WZ82 227 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 ADI1Q9BV57 179 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 CADM1Q9BY67 442 aaKnown RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 RHBDL2Q9NX52 303 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 GTPBP1O00178 669 aaKnown RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 RHOP08100 348 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 SLC35G6P0C7Q6 338 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 CLK3P49761 638 aaKnown RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 FAM174BQ3ZCQ3 159 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 SLC44A4Q53GD3 710 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 TMCO2Q7Z6W1 182 aaPredicted RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 ANKRD46Q86W74 232 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 C12orf76Q8N812 135 aaPredicted RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 IL12RB2Q99665 862 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 PCBD2Q9H0N5 130 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 WDR26Q9H7D7 661 aa15.17■□□□□ 0.02
TIMP3-201ENST00000266085 CLK4Q9HAZ1 481 aaKnown RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 CNOT6Q9ULM6 557 aaKnown RBP15.17■□□□□ 0.02
TIMP3-201ENST00000266085 ZNF840PA6NDX5 716 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 A8MT66 165 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 ITGB1P05556 798 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 ACP5P13686 325 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 PTPRCAPQ14761 206 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.16■□□□□ 0.022e-7■■■■■ 32.1
TIMP3-201ENST00000266085 AMER2Q8N7J2 671 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 IRF7Q92985 503 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 MTERF1Q99551 399 aaKnown RBP15.16■□□□□ 0.02
TIMP3-201ENST00000266085 PCDHGB3Q9Y5G1 929 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 H3BNH8 94 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 GPIP06744 558 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 JAK1P23458 1154 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 GALNT18Q6P9A2 607 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 B3GNT6Q6ZMB0 384 aa15.16■□□□□ 0.02
TIMP3-201ENST00000266085 LMLNQ96KR4 655 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms