RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 C2CD4AQ8NCU7 369 aaPredicted RBP16.85■□□□□ 0.29
SRF-201ENST00000265354 OR52B6Q8NGF0 335 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 TDRD1Q9BXT4 1180 aaKnown RBP16.85■□□□□ 0.29
SRF-201ENST00000265354 KAT8Q9H7Z6 458 aaKnown RBP16.85■□□□□ 0.29
SRF-201ENST00000265354 LTB4R2Q9NPC1 389 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.85■□□□□ 0.29
SRF-201ENST00000265354 TBC1D14Q9P2M4 693 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 MALT1Q9UDY8 824 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 KRBA1A5PL33 1030 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 KRT87PA6NCN2 255 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 PRRG1O14668 218 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 SNX4O95219 450 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 HAPLN1P10915 354 aaPredicted RBP16.85■□□□□ 0.29
SRF-201ENST00000265354 PLA2G16P53816 162 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 TP53BP2Q13625 1128 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 ZNF598Q86UK7 904 aaKnown RBP16.85■□□□□ 0.29
SRF-201ENST00000265354 PACRGLQ8N7B6 248 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 RTL3Q8N8U3 475 aaKnown RBP16.85■□□□□ 0.29
SRF-201ENST00000265354 PPTC7Q8NI37 304 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 TMEM209Q96SK2 561 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 PAAF1Q9BRP4 392 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 ATP6V1HQ9UI12 483 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 PADI4Q9UM07 663 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 SMPD1P17405 629 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 RAB25P57735 213 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 ILF2Q12905 390 aaKnown RBP16.85■□□□□ 0.29
SRF-201ENST00000265354 BIRC8Q96P09 236 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 MAP1BP46821 2468 aaKnown RBP16.85■□□□□ 0.29
SRF-201ENST00000265354 FAM25AB3EWG3 89 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 FAM25CB3EWG5 89 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 FAM25GB3EWG6 89 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 OR1I1O60431 355 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 SRP54P61011 504 aaKnown RBP16.85■□□□□ 0.29
SRF-201ENST00000265354 SPIBQ01892 262 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 AFTPHQ6ULP2 937 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 ENPP6Q6UWR7 440 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 ARRDC4Q8NCT1 418 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 KCNC2Q96PR1 638 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 GFM1Q96RP9 751 aaKnown RBP16.85■□□□□ 0.29
SRF-201ENST00000265354 HDHD2Q9H0R4 259 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 FBXO44Q9H4M3 255 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 MRPS7Q9Y2R9 242 aaKnown RBP16.85■□□□□ 0.29
SRF-201ENST00000265354 PCDHB5Q9Y5E4 795 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 PTCH2Q9Y6C5 1203 aa16.85■□□□□ 0.29
SRF-201ENST00000265354 AXIN1O15169 862 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 CDH1P12830 882 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 PRKACBP22694 351 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 ARHGAP1Q07960 439 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 SKIV2LQ15477 1246 aaKnown RBP16.84■□□□□ 0.29
SRF-201ENST00000265354 C6orf136Q5SQH8 315 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 TPGS1Q6ZTW0 290 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 ISCA2Q86U28 154 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 KHSRPQ92945 711 aaKnown RBP eCLIP16.84■□□□□ 0.29
SRF-201ENST00000265354 TBCCD1Q9NVR7 557 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 AGO1Q9UL18 857 aaKnown RBP16.84■□□□□ 0.29
SRF-201ENST00000265354 UBR2Q8IWV8 1755 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 IFRD1O00458 451 aaPredicted RBP16.84■□□□□ 0.29
SRF-201ENST00000265354 BCAS1O75363 584 aaPredicted RBP16.84■□□□□ 0.29
SRF-201ENST00000265354 RASAL1O95294 804 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 BMP2P12643 396 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 RRM2P31350 389 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 NR4A2P43354 598 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 INTS6LQ5JSJ4 861 aaKnown RBP16.84■□□□□ 0.29
SRF-201ENST00000265354 ITIH5Q86UX2 942 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 NSUN3Q9H649 340 aaKnown RBP16.84■□□□□ 0.29
SRF-201ENST00000265354 C14orf119Q9NWQ9 140 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 RAB23Q9ULC3 237 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 MMP3P08254 477 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 TYMPP19971 482 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 HLCSP50747 726 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 ZNF135P52742 658 aaPredicted RBP16.84■□□□□ 0.29
SRF-201ENST00000265354 GTF2H2Q13888 395 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 CYP27C1Q4G0S4 372 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 TRIQKQ629K1 86 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 GTF2H2CQ6P1K8 395 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 ELMOD2Q8IZ81 293 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 ANKFN1Q8N957 763 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 PTERQ96BW5 349 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 MRGPRX2Q96LB1 330 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 RANBP9Q96S59 729 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 TRPC4Q9UBN4 977 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 ZNF221Q9UK13 617 aa16.84■□□□□ 0.29
SRF-201ENST00000265354 IRAK2O43187 625 aa16.83■□□□□ 0.29
SRF-201ENST00000265354 ANXA5P08758 320 aa16.83■□□□□ 0.29
SRF-201ENST00000265354 HNF4AP41235 474 aa16.83■□□□□ 0.29
SRF-201ENST00000265354 AIF1P55008 147 aa16.83■□□□□ 0.29
SRF-201ENST00000265354 RPS24P62847 133 aaKnown RBP16.83■□□□□ 0.29
SRF-201ENST00000265354 ALFQ53S48 1182 aa16.83■□□□□ 0.29
SRF-201ENST00000265354 BRMS1LQ5PSV4 323 aa16.83■□□□□ 0.29
SRF-201ENST00000265354 ADAMTSL2Q86TH1 951 aa16.83■□□□□ 0.29
SRF-201ENST00000265354 NTAN1Q96AB6 310 aa16.83■□□□□ 0.29
SRF-201ENST00000265354 OSBPL2Q9H1P3 480 aa16.83■□□□□ 0.29
SRF-201ENST00000265354 FAM234BA2RU67 622 aa16.83■□□□□ 0.28
SRF-201ENST00000265354 CXCL11O14625 94 aa16.83■□□□□ 0.28
SRF-201ENST00000265354 ZNF195O14628 629 aa16.83■□□□□ 0.28
SRF-201ENST00000265354 PRMT5O14744 637 aaPredicted RBP16.83■□□□□ 0.28
SRF-201ENST00000265354 PER2O15055 1255 aa16.83■□□□□ 0.28
SRF-201ENST00000265354 CKMP06732 381 aa16.83■□□□□ 0.28
SRF-201ENST00000265354 ALDOCP09972 364 aaKnown RBP16.83■□□□□ 0.28
SRF-201ENST00000265354 MBL2P11226 248 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms