RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 GTPBP1O00178 669 aaKnown RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 SEPT4O43236 478 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 NDUFS2O75306 463 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 ERN1O75460 977 aaKnown RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 OR5F1O95221 314 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 ZNF12P17014 697 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 GPR33Q49SQ1 333 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 IFI44LQ53G44 452 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 PIK3R6Q5UE93 754 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 CHADLQ6NUI6 762 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 FRMD7Q6ZUT3 714 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 ADGRG2Q8IZP9 1017 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 OR13C4Q8NGS5 318 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 OR5K1Q8NHB7 308 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 ZNF395Q9H8N7 513 aaPredicted RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 RPRD1BQ9NQG5 326 aaKnown RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 TRNAU1APQ9NX07 287 aaKnown RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 EURLQ9NYK6 297 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 CPQQ9Y646 472 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 E7ENX8 843 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 H3BNH8 94 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 MATN2O00339 956 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 FFAR2O15552 330 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 SLC25A12O75746 678 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 CCNKO75909 580 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 AHSGP02765 367 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 ELNP15502 786 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 IDSP22304 550 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 CDH12P55289 794 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 RGS8P57771 180 aaPredicted RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 ECT2LQ008S8 904 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 SP2Q02086 613 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 DAG1Q14118 895 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 HEPACAMQ14CZ8 416 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 PAFAH1B3Q15102 231 aaKnown RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 CNPY1Q3B7I2 92 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 CDCA2Q69YH5 1023 aaPredicted RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 CHST9Q7L1S5 443 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 NPAS4Q8IUM7 802 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 CFAP206Q8IYR0 622 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 LRRC15Q8TF66 581 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 FEM1AQ9BSK4 669 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 TRIT1Q9H3H1 467 aaKnown RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 AKAP7Q9P0M2 348 aaPredicted RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 ZNF222Q9UK12 451 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 PEX16Q9Y5Y5 336 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 PHLPP1O60346 1717 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 hCG_2039718K7EN88 272 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 SLC30A4O14863 429 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 KLHL18O94889 574 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 SIX3O95343 332 aaPredicted RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 MLLT6P55198 1093 aaPredicted RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 GAD2Q05329 585 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 SLC10A7Q0GE19 358 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 INCA1Q0VD86 236 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 IL18R1Q13478 541 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 LARS2Q15031 903 aaKnown RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 ALG11Q2TAA5 492 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 LMO3Q8TAP4 145 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 EZH1Q92800 747 aaPredicted RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 EXOSC8Q96B26 276 aaKnown RBP10.6□□□□□ -0.71
CD44-201ENST00000263398 LRRC58Q96CX6 371 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 BORCS6Q96GS4 357 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 TUBGCP5Q96RT8 1024 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 MYOCQ99972 504 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 TESMINQ9Y4I5 508 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 ARL5AQ9Y689 179 aa10.6□□□□□ -0.71
CD44-201ENST00000263398 DUOX1Q9NRD9 1551 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 OR51F1A6NGY5 319 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 LRRC14BA6NHZ5 514 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 DNTTP04053 509 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 CLK3P49761 638 aaKnown RBP10.59□□□□□ -0.71
CD44-201ENST00000263398 RAB15P59190 212 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 DEFB115Q30KQ5 88 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 RTL4Q6ZR62 310 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 RAB43Q86YS6 212 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 OR10G6Q8NH81 332 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 SEC14L1Q92503 715 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 FCGR1BQ92637 280 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 ACDQ96AP0 544 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 DIRAS2Q96HU8 199 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 MCCC1Q96RQ3 725 aaPredicted RBP10.59□□□□□ -0.71
CD44-201ENST00000263398 HEPHQ9BQS7 1158 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 AKTIPQ9H8T0 292 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 EQTNQ9NQ60 294 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 POLR3BQ9NW08 1133 aaPredicted RBP10.59□□□□□ -0.71
CD44-201ENST00000263398 NKX1-2Q9UD57 310 aaPredicted RBP10.59□□□□□ -0.71
CD44-201ENST00000263398 C5P01031 1676 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 ARFGEF2Q9Y6D5 1785 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 SLC38A8A6NNN8 435 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 SDC2P34741 201 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 OMPP47874 163 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 ZNF33AQ06730 810 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 ATP13A5Q4VNC0 1218 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 SH3D19Q5HYK7 790 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 BEND5Q7L4P6 421 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 SNX20Q7Z614 316 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 LAPTM4BQ86VI4 370 aa10.59□□□□□ -0.71
CD44-201ENST00000263398 ARL14EPQ8N8R7 260 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms