RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 KIAA0319Q5VV43 1072 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 GTF2IRD2BQ6EKJ0 949 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 NECAB2Q7Z6G3 386 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 GTF2IRD2Q86UP8 949 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 ZDHHC17Q8IUH5 632 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 PACRGLQ8N7B6 248 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 ASB12Q8WXK4 309 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 TRMT6Q9UJA5 497 aaKnown RBP13.97□□□□□ -0.17
SCARF1-201ENST00000263071 VPS28Q9UK41 221 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 SHROOM3Q8TF72 1996 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 RBP1P09455 135 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 MSH3P20585 1137 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 CD9P21926 228 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 TRIM23P36406 574 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 NRG1Q02297 640 aaPredicted RBP13.97□□□□□ -0.17
SCARF1-201ENST00000263071 SGO1Q5FBB7 561 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 LINC00299Q6ZSB3 139 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 METTL4Q8N3J2 472 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 PTGR2Q8N8N7 351 aaPredicted RBP13.97□□□□□ -0.17
SCARF1-201ENST00000263071 ANKFN1Q8N957 763 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 FAM83FQ8NEG4 500 aaPredicted RBP13.97□□□□□ -0.17
SCARF1-201ENST00000263071 AKAP1Q92667 903 aaKnown RBP eCLIP13.97□□□□□ -0.17
SCARF1-201ENST00000263071 TEKT5Q96M29 485 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 RIPOR3Q96MK2 946 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 USP3Q9Y6I4 520 aa13.97□□□□□ -0.17
SCARF1-201ENST00000263071 A0A0J9YYE9 177 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 OR6C70A6NIJ9 312 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 A8MT66 165 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 E5RI56 91 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 UBXN8O00124 270 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 EI24O14681 340 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 TFECO14948 347 aaPredicted RBP13.96□□□□□ -0.17
SCARF1-201ENST00000263071 KATNA1O75449 491 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 HGFP14210 728 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 ATP6V1B2P21281 511 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 FASP25445 335 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 SCNN1GP51170 649 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 FOXA1P55317 472 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 SNRPD2P62316 118 aaKnown RBP13.96□□□□□ -0.17
SCARF1-201ENST00000263071 CD83Q01151 205 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 IMPG1Q17R60 797 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 OTUD1Q5VV17 481 aaPredicted RBP13.96□□□□□ -0.17
SCARF1-201ENST00000263071 PKN3Q6P5Z2 889 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 PIK3C3Q8NEB9 887 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 ACOX2Q99424 681 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 NPY6RQ99463 290 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 ABCG8Q9H221 673 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 SAV1Q9H4B6 383 aaPredicted RBP13.96□□□□□ -0.17
SCARF1-201ENST00000263071 LTB4R2Q9NPC1 389 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 TAS2R9Q9NYW1 312 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 MAGED1Q9Y5V3 778 aaPredicted RBP13.96□□□□□ -0.17
SCARF1-201ENST00000263071 COL2A1P02458 1487 aaPredicted RBP13.96□□□□□ -0.17
SCARF1-201ENST00000263071 PTGES3LE9PB15 166 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 PDHXO00330 501 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 DCLK1O15075 740 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 ZNF780AO75290 641 aaPredicted RBP13.96□□□□□ -0.17
SCARF1-201ENST00000263071 SNAP29O95721 258 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 JUNBP17275 347 aaPredicted RBP13.96□□□□□ -0.17
SCARF1-201ENST00000263071 RPS12P25398 132 aaKnown RBP13.96□□□□□ -0.17
SCARF1-201ENST00000263071 KCNC1P48547 511 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 PIK3CGP48736 1102 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 GRB7Q14451 532 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 SV2CQ496J9 727 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 GDPD3Q7L5L3 318 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 GLB1L3Q8NCI6 653 aaPredicted RBP13.96□□□□□ -0.17
SCARF1-201ENST00000263071 SPPL2BQ8TCT7 592 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 FAR1Q8WVX9 515 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 DEDD2Q8WXF8 326 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 ST6GAL2Q96JF0 529 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 SMIM14Q96QK8 99 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 TMEM209Q96SK2 561 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 SPON2Q9BUD6 331 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 ROGDIQ9GZN7 287 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 CRTAC1Q9NQ79 661 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 SMPD3Q9NY59 655 aaPredicted RBP13.96□□□□□ -0.17
SCARF1-201ENST00000263071 DPP7Q9UHL4 492 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 ENOPH1Q9UHY7 261 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 KLF15Q9UIH9 416 aa13.96□□□□□ -0.17
SCARF1-201ENST00000263071 ZNF98A6NK75 572 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 SMPD1P17405 629 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 OXTRP30559 389 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 DDOSTP39656 456 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 SOX9P48436 509 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 NPY2RP49146 381 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 DIO3P55073 304 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 MCCD1P59942 119 aaPredicted RBP13.96□□□□□ -0.18
SCARF1-201ENST00000263071 NFYCQ13952 458 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 ZNF704Q6ZNC4 412 aaPredicted RBP13.96□□□□□ -0.18
SCARF1-201ENST00000263071 ZNF767PQ75MW2 155 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 CLEC4FQ8N1N0 589 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 GPR22Q99680 433 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 SMOQ99835 787 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 SEC22CQ9BRL7 303 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 BDH2Q9BUT1 245 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 SLC39A8Q9C0K1 460 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 CASS4Q9NQ75 786 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 NPAP1Q9NZP6 1156 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 CYB5R1Q9UHQ9 305 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 RAD54BQ9Y620 910 aa13.96□□□□□ -0.18
SCARF1-201ENST00000263071 LRRC72A6NJI9 287 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms