RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 COPS7AQ9UBW8 275 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 XIRP1Q702N8 1843 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 STRCQ7RTU9 1775 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 MEIS2O14770 477 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ENTPD6O75354 484 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 APOL3O95236 402 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 RB1P06400 928 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PET100P0DJ07 73 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CCNFP41002 786 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 BTN3A2P78410 334 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CYP4X1Q8N118 509 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 NIPA2Q8N8Q9 360 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 C12orf29Q8N999 325 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 SLC43A3Q8NBI5 491 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CNPPD1Q9BV87 410 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF69Q9UC07 566 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CDH7Q9ULB5 785 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 RPL36Q9Y3U8 105 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 A0A1W2PQ67 120 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 UBXN7O94888 489 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 NDST3O95803 873 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TACSTD2P09758 323 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 GRIA2P42262 883 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 LIMK2P53671 638 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 MAZP56270 477 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 FOXM1Q08050 763 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ZBTB6Q15916 424 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CYP1B1Q16678 543 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 LCLAT1Q6UWP7 414 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF517Q6ZMY9 492 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF567Q8N184 647 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 KLHL36Q8N4N3 616 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 VGLL2Q8N8G2 317 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 LRTOMTQ8WZ04 291 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 P2RY11Q96G91 374 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 AURKBQ96GD4 344 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 KCNS3Q9BQ31 491 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 IDI2Q9BXS1 227 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PRDM12Q9H4Q4 367 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CLEC4AQ9UMR7 237 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 RBM7Q9Y580 266 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 U3KQV3 271 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 FABP12A6NFH5 140 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 DDTLA6NHG4 134 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TRIM3O75382 744 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 SCGNO76038 276 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 IL1BP01584 269 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 YES1P07947 543 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 NELFEP18615 380 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 IL12BP29460 328 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 XKP51811 444 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CEBPGP53567 150 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TAF1AQ15573 450 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TBC1D25Q3MII6 688 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 FAM174BQ3ZCQ3 159 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ZACNQ401N2 412 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 SPIN4Q56A73 249 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 IDNKQ5T6J7 187 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 NIPAL1Q6NVV3 410 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 XYLT1Q86Y38 959 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TTC29Q8NA56 475 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TRAPPC12Q8WVT3 735 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 WDR18Q9BV38 432 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TRIM17Q9Y577 477 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PMF1-BGLAPU3KQ54 211 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 MAGEB17A8MXT2 336 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CYP3A5P20815 502 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ECHS1P30084 290 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 DNAJA1P31689 397 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PIK3CBP42338 1070 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CRYBB1P53674 252 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CDK18Q07002 472 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CBFBQ13951 182 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 NOL9Q5SY16 702 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 GALNTL5Q7Z4T8 443 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PNLDC1Q8NA58 520 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TTLQ8NG68 377 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 SLC4A9Q96Q91 983 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 COPS4Q9BT78 406 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 EQTNQ9NQ60 294 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PATJQ8NI35 1801 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 ATP6AP2A0A1C7CYW4 349 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 H0Y858 1186 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 PRPS2P11908 318 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 KELP23276 732 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 HADHBP55084 474 aaKnown RBP4.73□□□□□ -1.65
RC3H1-201ENST00000258349 CRTC2Q53ET0 693 aaPredicted RBP4.73□□□□□ -1.65
RC3H1-201ENST00000258349 C1orf189Q5VU69 101 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 EIF5AL1Q6IS14 154 aaKnown RBP4.73□□□□□ -1.65
RC3H1-201ENST00000258349 MED27Q6P2C8 311 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 SCIMPQ6UWF3 145 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 CMC1Q7Z7K0 106 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 GALNT7Q86SF2 657 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF227Q86WZ6 799 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 LINC00471Q8N535 108 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF527Q8NB42 609 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 OR2L3Q8NG85 312 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 SLC16A10Q8TF71 515 aa4.73□□□□□ -1.65
RC3H1-201ENST00000258349 ZBED6CLQ96FA7 236 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms