RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TMEM174Q8WUU8 243 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 TIFAQ96CG3 184 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 TBATAQ96M53 351 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 CTRCQ99895 268 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 TRMOQ9BU70 441 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 TP63Q9H3D4 680 aaPredicted RBP10.84□□□□□ -0.67
COPA-201ENST00000241704 SMOC2Q9H3U7 446 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 H2AFY2Q9P0M6 372 aaPredicted RBP10.84□□□□□ -0.67
COPA-201ENST00000241704 SOBPA7XYQ1 873 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 CXorf49A8MYA2 514 aaPredicted RBP10.84□□□□□ -0.67
COPA-201ENST00000241704 PRMT5O14744 637 aaPredicted RBP10.84□□□□□ -0.67
COPA-201ENST00000241704 KMOO15229 486 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 SLC31A1O15431 190 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 NUAK1O60285 661 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 RFPL1O75677 317 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 CEACAM7Q14002 265 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 SNAP47Q5SQN1 464 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 ZCCHC8Q6NZY4 707 aaKnown RBP10.84□□□□□ -0.67
COPA-201ENST00000241704 TXNDC11Q6PKC3 985 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 OR52B2Q96RD2 323 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 TEX264Q9Y6I9 313 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 NUMBLQ9Y6R0 609 aa10.84□□□□□ -0.67
COPA-201ENST00000241704 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.83□□□□□ -0.68
COPA-201ENST00000241704 LINC00854A0A1B0GVQ3 168 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.83□□□□□ -0.68
COPA-201ENST00000241704 ZNF487B1APH4 448 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 SLC22A1O15245 554 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 INSIG1O15503 277 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 GUCY1B2O75343 617 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 CYBAP13498 195 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 PPP2R1BP30154 601 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 CENPAP49450 140 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 PDGFRLQ15198 375 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 SF3B4Q15427 424 aaKnown RBP eCLIP10.83□□□□□ -0.689e-7■■■■□ 21
COPA-201ENST00000241704 TEAD4Q15561 434 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 TSTD2Q5T7W7 516 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 HECTD2Q5U5R9 776 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 ESRP1Q6NXG1 681 aaKnown RBP10.83□□□□□ -0.68
COPA-201ENST00000241704 CHSY3Q70JA7 882 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 FAM126BQ8IXS8 530 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 RPL10LQ96L21 214 aaKnown RBP10.83□□□□□ -0.68
COPA-201ENST00000241704 NSMCE2Q96MF7 247 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 TNKS2Q9H2K2 1166 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 POU2F3Q9UKI9 436 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 KRT87PA6NCN2 255 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 ENPP3O14638 875 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 IQCF3P0C7M6 154 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 PKMP14618 531 aaKnown RBP10.83□□□□□ -0.68
COPA-201ENST00000241704 NRLP54845 237 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 ILF3Q12906 894 aaKnown RBP eCLIP10.83□□□□□ -0.682e-8■■■■■ 28.7
COPA-201ENST00000241704 PAFAH1B3Q15102 231 aaKnown RBP10.83□□□□□ -0.68
COPA-201ENST00000241704 TXNDC8Q6A555 127 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 CNSTQ6PJW8 725 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 TBC1D21Q8IYX1 336 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 TMEM40Q8WWA1 233 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 UBE2E3Q969T4 207 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 PEBP4Q96S96 227 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 IL12RB2Q99665 862 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 NUAK2Q9H093 628 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 IL23AQ9NPF7 189 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 CCDC177Q9NQR7 707 aaPredicted RBP10.83□□□□□ -0.68
COPA-201ENST00000241704 TMEM216Q9P0N5 145 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 SNX8Q9Y5X2 465 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 MYADML2A6NDP7 307 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 TBX1O43435 398 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 POP4O95707 220 aaKnown RBP10.83□□□□□ -0.68
COPA-201ENST00000241704 NMBRP28336 390 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 GPR15P49685 360 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 CLK3P49761 638 aaKnown RBP10.83□□□□□ -0.68
COPA-201ENST00000241704 CCT8P50990 548 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 AP1S1P61966 158 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 DMC1Q14565 340 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 FAM98BQ52LJ0 330 aaKnown RBP10.83□□□□□ -0.68
COPA-201ENST00000241704 PIGGQ5H8A4 983 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 AGAP7PQ5VUJ5 663 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 TRMT10BQ6PF06 316 aaKnown RBP10.83□□□□□ -0.68
COPA-201ENST00000241704 VITQ6UXI7 678 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 CERS6Q6ZMG9 384 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 ERMP1Q7Z2K6 904 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 GPR135Q8IZ08 494 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 ZNF461Q8TAF7 563 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 NXNL1Q96CM4 212 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 SAMD11Q96NU1 681 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 SIAEQ9HAT2 523 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 A0A1B0GUL6 1792 aa10.83□□□□□ -0.68
COPA-201ENST00000241704 CCDC154A6NI56 674 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 PCP4L1A6NKN8 68 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 NRP2O60462 931 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 TSC22D2O75157 780 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 FGF3P11487 239 aaPredicted RBP10.82□□□□□ -0.68
COPA-201ENST00000241704 DCKP27707 260 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 MAGEA11P43364 429 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 ABRQ12979 859 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 DENND5AQ6IQ26 1287 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 FSTL4Q6MZW2 842 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 FBXL22Q6P050 247 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 PRR23BQ6ZRT6 265 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 GRASPQ7Z6J2 395 aaPredicted RBP10.82□□□□□ -0.68
COPA-201ENST00000241704 SPPL2CQ8IUH8 684 aa10.82□□□□□ -0.68
COPA-201ENST00000241704 ABHD11Q8NFV4 315 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms