RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 TREML1Q86YW5 311 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 ZNF547Q8IVP9 402 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 LILRA3Q8N6C8 439 aaPredicted RBP14.91□□□□□ -0.02
HDHD3-201ENST00000238379 SKA2Q8WVK7 121 aaPredicted RBP14.91□□□□□ -0.02
HDHD3-201ENST00000238379 ZNF514Q96K75 400 aaPredicted RBP14.91□□□□□ -0.02
HDHD3-201ENST00000238379 GUCD1Q96NT3 240 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 EGFL8Q99944 293 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 TMEM79Q9BSE2 394 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 CCDC28BQ9BUN5 200 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 MEAF6Q9HAF1 191 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 PARVBQ9HBI1 364 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 FAM8A1Q9UBU6 413 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 ZNF225Q9UK10 706 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 FZD4Q9ULV1 537 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 MMP17Q9ULZ9 603 aa14.91□□□□□ -0.02
HDHD3-201ENST00000238379 A0A1W2PQU0 124 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 E9PBE3 544 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 AZIN1O14977 448 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 KLHL41O60662 606 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 SKAP2O75563 359 aaPredicted RBP14.9□□□□□ -0.02
HDHD3-201ENST00000238379 MATN4O95460 622 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 TEAD1P28347 426 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 PRDX3P30048 256 aaKnown RBP14.9□□□□□ -0.02
HDHD3-201ENST00000238379 TRIM23P36406 574 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 INHBCP55103 352 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 FOXA1P55317 472 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 CDK3Q00526 305 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 CDKL1Q00532 357 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 SP140Q13342 867 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 NUMA1Q14980 2115 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 TTC31Q49AM3 519 aaPredicted RBP14.9□□□□□ -0.02
HDHD3-201ENST00000238379 SYTL3Q4VX76 610 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 KANK2Q63ZY3 851 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 MBOAT1Q6ZNC8 495 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 ACAD11Q709F0 780 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 ASRGL1Q7L266 308 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 TRAPPC5Q8IUR0 188 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 TP53I13Q8NBR0 393 aaPredicted RBP14.9□□□□□ -0.02
HDHD3-201ENST00000238379 OR56A4Q8NGH8 313 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 UBTD2Q8WUN7 234 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 TMEM159Q96B96 161 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 PTCD3Q96EY7 689 aaKnown RBP14.9□□□□□ -0.02
HDHD3-201ENST00000238379 NSL1Q96IY1 281 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 LINC00615Q96LM1 132 aaPredicted RBP14.9□□□□□ -0.02
HDHD3-201ENST00000238379 LGR4Q9BXB1 951 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 TEX101Q9BY14 249 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 OSBPL6Q9BZF3 934 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 CD244Q9BZW8 370 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 GPR34Q9UPC5 381 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 TRIM33Q9UPN9 1127 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 TMEM98Q9Y2Y6 226 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 DNAJC15Q9Y5T4 150 aa14.9□□□□□ -0.02
HDHD3-201ENST00000238379 PRR23AA6NEV1 266 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 PRR5-ARHGAP8B1AHC4 643 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 LOC730098B7Z3J9 87 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 RNGTTO60942 597 aaKnown RBP14.89□□□□□ -0.03
HDHD3-201ENST00000238379 DNAJC8O75937 253 aaPredicted RBP14.89□□□□□ -0.03
HDHD3-201ENST00000238379 ESRRBO95718 433 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 ANXA5P08758 320 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 NCF2P19878 526 aaPredicted RBP14.89□□□□□ -0.03
HDHD3-201ENST00000238379 PREPP48147 710 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 HSPA7P48741 367 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 ARHGAP8P85298 464 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 GTF2H3Q13889 308 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 INPP5AQ14642 412 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 IRF4Q15306 451 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 MAP7D1Q3KQU3 841 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 METTL2BQ6P1Q9 378 aaKnown RBP14.89□□□□□ -0.03
HDHD3-201ENST00000238379 XKR5Q6UX68 686 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 SYVN1Q86TM6 617 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 SLC22A15Q8IZD6 547 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 KLK6Q92876 244 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 SLC7A6OSQ96CW6 309 aaPredicted RBP14.89□□□□□ -0.03
HDHD3-201ENST00000238379 KCNA7Q96RP8 456 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 TUBB6Q9BUF5 446 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 SLC17A9Q9BYT1 436 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 TRIM54Q9BYV2 358 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 PREBQ9HCU5 417 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 ARL15Q9NXU5 204 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 NDRG2Q9UN36 371 aaKnown RBP14.89□□□□□ -0.03
HDHD3-201ENST00000238379 DOCK9Q9BZ29 2069 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 MAN2B1O00754 1011 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 PSIP1O75475 530 aaKnown RBP14.89□□□□□ -0.03
HDHD3-201ENST00000238379 GSTM1P09488 218 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 IL9P15248 144 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 NDUFV2P19404 249 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 AOC1P19801 751 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 PDHA2P29803 388 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 PBLDP30039 288 aaPredicted RBP14.89□□□□□ -0.03
HDHD3-201ENST00000238379 GDF5P43026 501 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 GSTM4Q03013 218 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 SGCGQ13326 291 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 MLF2Q15773 248 aaPredicted RBP14.89□□□□□ -0.03
HDHD3-201ENST00000238379 TBCCQ15814 346 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 ZXDCQ2QGD7 858 aaPredicted RBP14.89□□□□□ -0.03
HDHD3-201ENST00000238379 NEK5Q6P3R8 708 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 GOLGA7Q7Z5G4 137 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 C11orf96Q7Z7L8 435 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 KBTBD6Q86V97 674 aa14.89□□□□□ -0.03
HDHD3-201ENST00000238379 HORMAD1Q86X24 394 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms