RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Il4i1O09046 630 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Slc2a3P32037 493 aaKnown RBP20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tbx1P70323 479 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Ttyh2Q3TH73 532 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 SbplQ3TUY3 232 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Slc30a10Q3UVU3 470 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Map3k3Q61084 626 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Cyp2d40Q6P8N9 338 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Q8C3I9 435 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Dedd2Q8QZV0 330 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Alg9Q8VDI9 611 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Gpn2Q8VEJ1 310 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Rcc1lQ9CYF5 461 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Plscr1Q9JJ00 328 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Vmn2r25W4VSP2 855 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Zfhx4Q9JJN2 3550 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 SetxA2AKX3 2646 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Igkv6-32A0A140T8N9 115 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tsc22d2E9Q7M2 769 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Ephx2P34914 554 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 HalP35492 657 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 PpargP37238 505 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 NcstnP57716 708 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tial1P70318 392 aaKnown RBP20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Dlx5P70396 289 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Serpina6Q06770 397 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Nab1Q61122 486 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Zc3h10Q8R205 435 aaKnown RBP20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Retreg1dQ8VE91 480 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Trappc5Q9CQA1 188 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Nudt21Q9CQF3 227 aaKnown RBP20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Lrrc40Q9CRC8 602 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Commd8Q9CZG3 183 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Mfsd2aQ9DA75 534 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 MioxQ9QXN5 285 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Mrpl40Q9Z2Q5 206 aa20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Nup205A0A0J9YUD5 2061 aaKnown RBP20.49■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Gm29797A0A140LIA7 188 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Olfr566A0A1B0GST0 319 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Fam166bA2AIP0 273 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 6330409D20RikA2AK85 162 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Cdh19E9Q3A7 770 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Foxd2O35392 492 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Gap43P06837 227 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Dnmt3cP0DOY1 709 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 CtsdP18242 410 aaKnown RBP20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 PlgP20918 812 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Mmp13P33435 472 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 ApodP51910 189 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Gabrb3P63080 473 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Ccdc127Q3TC33 260 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Rrp36Q3UFY0 244 aaKnown RBP20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Ppp1r7Q3UM45 361 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Otol1Q4ZJM7 482 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Cyb5d1Q5NCY3 228 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Wdr48Q8BH57 676 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tmem214Q8BM55 687 aaKnown RBP20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Znf76Q8BMU0 568 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Zfp398Q8BV16 643 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 C1qtnf7Q8BVD7 289 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tmem154Q8C4Q9 181 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Nox1Q8CIZ9 591 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Pacs1Q8K212 961 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Stx19Q8R1Q0 292 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Cdc42ep1Q91W92 409 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Syf2Q9D198 242 aaKnown RBP20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 RalbQ9JIW9 206 aa20.48■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Gm29554A0A087WNW4 188 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tcrg-V3A0A0G2JEW2 117 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Oas1eA0A0J9YV76 386 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Gm35911A0A1D5RLS7 214 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 A0A1Y7VP24 259 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Zfp352A2AML7 551 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tgm7A2ART8 616 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Vmn2r21K7N6Y7 853 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Vmn2r20L7N2B1 853 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Kpna3O35344 521 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Il1aP01582 270 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 ChrngP04760 519 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 HmbsP22907 361 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Fbxo40P62932 710 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Trim43bP86448 445 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Pfdn6Q03958 127 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Fam160a1Q505K2 1081 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Foxd4Q60688 444 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tmem270Q6UJB9 264 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Mtch2Q791V5 303 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Alkbh8Q80Y20 664 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Ppm1nQ8BGL1 404 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Klhl38Q8BSF5 581 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Mrpl22Q8BU88 206 aaKnown RBP20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Dcun1d2Q8BZJ7 259 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Fbxo48Q8CAT8 161 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Vmn1r185Q8R299 319 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Olfr273Q8VG87 317 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Smc6Q924W5 1097 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Dtwd2Q9D0U1 298 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Bpifa3Q9D9J8 232 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 AcadsbQ9DBL1 432 aa20.47■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Nt5cQ9JM14 200 aa20.47■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms