RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 KIF1CO43896 1103 aaKnown RBP16.1■□□□□ 0.17
COLCA2-206ENST00000638573 PRSS56P0CW18 603 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 MC4RP32245 332 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 CLCNKAP51800 687 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 TUBB2AQ13885 445 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 KIR2DS5Q14953 304 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 PCID2Q5JVF3 399 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 MANEAQ5SRI9 462 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 LDLRAP1Q5SW96 308 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 IZUMO3Q5VZ72 239 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 DUS1LQ6P1R4 473 aaKnown RBP16.1■□□□□ 0.17
COLCA2-206ENST00000638573 UNC5BQ8IZJ1 945 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 LILRA3Q8N6C8 439 aaPredicted RBP16.1■□□□□ 0.17
COLCA2-206ENST00000638573 ZNF398Q8TD17 642 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 NKD1Q969G9 470 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 ULK4Q96C45 1275 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 TUBB2BQ9BVA1 445 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 FAM96AQ9H5X1 160 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 SMOXQ9NWM0 555 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 TCAF1Q9Y4C2 921 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 CFAP20Q9Y6A4 193 aaKnown RBP16.1■□□□□ 0.17
COLCA2-206ENST00000638573 SDK2Q58EX2 2172 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 ATMQ13315 3056 aa16.1■□□□□ 0.17
COLCA2-206ENST00000638573 TCRBV7S3A2A0A539 114 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 MROH6A6NGR9 719 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 GPR89AB7ZAQ6 455 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 GOLGA8MH3BSY2 632 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 H7C0S8 307 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 VEGFDO43915 354 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 TMEM63AO94886 807 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 GPR89BP0CG08 455 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 MLNP12872 115 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 MGAT1P26572 445 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 AKT1P31749 480 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 SH3BP2P78314 561 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 TRA2AQ13595 282 aaKnown RBP eCLIP16.09■□□□□ 0.17
COLCA2-206ENST00000638573 PEX6Q13608 980 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 GPR18Q14330 331 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 NFE2L1Q14494 772 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 ZRANB3Q5FWF4 1079 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 TSTD2Q5T7W7 516 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 ANKRD22Q5VYY1 191 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 TMEM220Q6QAJ8 160 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 TMEM26Q6ZUK4 368 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 TIPARPQ7Z3E1 657 aaKnown RBP16.09■□□□□ 0.17
COLCA2-206ENST00000638573 SNX20Q7Z614 316 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 HOOK3Q86VS8 718 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 MCUQ8NE86 351 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 PEX13Q92968 403 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.09■□□□□ 0.17
COLCA2-206ENST00000638573 TGM7Q96PF1 710 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 NRTNQ99748 197 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 TIMM29Q9BSF4 260 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 TRIM51Q9BSJ1 452 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 AKAP7Q9P0M2 348 aaPredicted RBP16.09■□□□□ 0.17
COLCA2-206ENST00000638573 SAMD15Q9P1V8 674 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 RIMKLBQ9ULI2 386 aa16.09■□□□□ 0.17
COLCA2-206ENST00000638573 ZFC3H1O60293 1989 aaKnown RBP16.09■□□□□ 0.17
COLCA2-206ENST00000638573 FAM187AA6NFU0 413 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 LILRA5A6NI73 299 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 SMAPO00193 183 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 POP7O75817 140 aaKnown RBP16.08■□□□□ 0.16
COLCA2-206ENST00000638573 VIPP01282 170 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 RALBP11234 206 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 LIFP15018 202 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 MSH3P20585 1137 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 SEPHS1P49903 392 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 CDKN1CP49918 316 aaPredicted RBP16.08■□□□□ 0.16
COLCA2-206ENST00000638573 PRAMEP78395 509 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 XIAPP98170 497 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 C19orf57Q0VDD7 668 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 CLPPQ16740 277 aaPredicted RBP16.08■□□□□ 0.16
COLCA2-206ENST00000638573 RNASEH2BQ5TBB1 312 aaKnown RBP16.08■□□□□ 0.16
COLCA2-206ENST00000638573 ARMC3Q5W041 872 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 CASC4Q6P4E1 433 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 WDR74Q6RFH5 385 aaPredicted RBP16.08■□□□□ 0.16
COLCA2-206ENST00000638573 ZNF534Q76KX8 674 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 ZNF572Q7Z3I7 529 aaPredicted RBP16.08■□□□□ 0.16
COLCA2-206ENST00000638573 TRIM48Q8IWZ4 208 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 NAT8LQ8N9F0 302 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 MNS1Q8NEH6 495 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 DDHD1Q8NEL9 900 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 SPDYE1Q8NFV5 336 aaPredicted RBP16.08■□□□□ 0.16
COLCA2-206ENST00000638573 SGF29Q96ES7 293 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 SNF8Q96H20 258 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 CDKN2AIPNLQ96HQ2 116 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 SERPINB12Q96P63 405 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 PCDHGA3Q9Y5H0 932 aa16.08■□□□□ 0.16
COLCA2-206ENST00000638573 EFCAB8A8MWE9 144 aa16.07■□□□□ 0.16
COLCA2-206ENST00000638573 CFAP99D6REC4 459 aa16.07■□□□□ 0.16
COLCA2-206ENST00000638573 STMND1H3BQB6 276 aa16.07■□□□□ 0.16
COLCA2-206ENST00000638573 TK2O00142 265 aa16.07■□□□□ 0.16
COLCA2-206ENST00000638573 SGTAO43765 313 aa16.07■□□□□ 0.16
COLCA2-206ENST00000638573 UBXN7O94888 489 aa16.07■□□□□ 0.16
COLCA2-206ENST00000638573 FAM87AP0C7U9 286 aa16.07■□□□□ 0.16
COLCA2-206ENST00000638573 ZNF28P17035 718 aa16.07■□□□□ 0.16
COLCA2-206ENST00000638573 XRCC1P18887 633 aaPredicted RBP16.07■□□□□ 0.16
COLCA2-206ENST00000638573 NFKB2Q00653 900 aa16.07■□□□□ 0.16
COLCA2-206ENST00000638573 CACNG1Q06432 222 aa16.07■□□□□ 0.16
COLCA2-206ENST00000638573 MORF4L2Q15014 288 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms