RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 CCR10P46092 362 aa20.68■□□□□ 0.9
CLN8-213ENST00000637156 FAM160A2Q8N612 972 aaPredicted RBP20.68■□□□□ 0.9
CLN8-213ENST00000637156 SREK1Q8WXA9 508 aaKnown RBP20.68■□□□□ 0.9
CLN8-213ENST00000637156 PHPT1Q9NRX4 125 aaPredicted RBP20.68■□□□□ 0.9
CLN8-213ENST00000637156 UTP6Q9NYH9 597 aaKnown RBP20.68■□□□□ 0.9
CLN8-213ENST00000637156 C17orf113A0A1B0GUU1 675 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 SYCE1LA8MT33 242 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 SNX3O60493 162 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 SMIM24O75264 130 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 ZNF217O75362 1048 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 MYCLP1P12525 358 aaPredicted RBP20.67■□□□□ 0.9
CLN8-213ENST00000637156 PDHA2P29803 388 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 PBLDP30039 288 aaPredicted RBP20.67■□□□□ 0.9
CLN8-213ENST00000637156 CD6P30203 668 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 PREPP48147 710 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 NFKB2Q00653 900 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 PHKG1Q16816 387 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 CRTC3Q6UUV7 619 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 SLC22A9Q8IVM8 553 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 CFAP206Q8IYR0 622 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 CCNYL1Q8N7R7 359 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 ASB11Q8WXH4 323 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 THOC1Q96FV9 657 aaKnown RBP20.67■□□□□ 0.9
CLN8-213ENST00000637156 GPR174Q9BXC1 333 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 DRC3Q9H069 523 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 SLC23A2Q9UGH3 650 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 DNAH14Q0VDD8 3507 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 NCF1BA6NI72 391 aaPredicted RBP20.67■□□□□ 0.9
CLN8-213ENST00000637156 NCF1CA8MVU1 366 aaPredicted RBP20.67■□□□□ 0.9
CLN8-213ENST00000637156 H0Y8X5 98 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 PI15O43692 258 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 APBB3O95704 486 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 CEACAM5P06731 702 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 NCF1P14598 390 aaPredicted RBP20.67■□□□□ 0.9
CLN8-213ENST00000637156 HNRNPA2B1P22626 353 aaKnown RBP20.67■□□□□ 0.9
CLN8-213ENST00000637156 ZNF678Q5SXM1 525 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 RPS27LQ71UM5 84 aaKnown RBP20.67■□□□□ 0.9
CLN8-213ENST00000637156 ADAMTSL2Q86TH1 951 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 LSMEM2Q8N112 164 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 PTGR2Q8N8N7 351 aaPredicted RBP20.67■□□□□ 0.9
CLN8-213ENST00000637156 GRAMD1AQ96CP6 724 aa20.67■□□□□ 0.9
CLN8-213ENST00000637156 FAM126AQ9BYI3 521 aaPredicted RBP20.67■□□□□ 0.9
CLN8-213ENST00000637156 NSRP1Q9H0G5 558 aaKnown RBP20.67■□□□□ 0.9
CLN8-213ENST00000637156 IGHV1OR15-9A0A0B4J2B8 117 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 SUPT3HB4E1H0 165 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 H2AFYO75367 372 aaKnown RBP20.66■□□□□ 0.9
CLN8-213ENST00000637156 SUPT3HO75486 399 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 SIX3O95343 332 aaPredicted RBP20.66■□□□□ 0.9
CLN8-213ENST00000637156 PDGFBP01127 241 aaPredicted RBP20.66■□□□□ 0.9
CLN8-213ENST00000637156 MPC1LP0DKB6 136 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 GFAPP14136 432 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 ARHGAP8P85298 464 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 FBXO48Q5FWF7 155 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 ARL13AQ5H913 290 aaPredicted RBP20.66■□□□□ 0.9
CLN8-213ENST00000637156 CAMKK1Q8N5S9 505 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 DENND6BQ8NEG7 585 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 OR2L2Q8NH16 312 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 TMEM159Q96B96 161 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 BIRC7Q96CA5 298 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 L3HYPDHQ96EM0 354 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 TM7SF3Q9NS93 570 aa20.66■□□□□ 0.9
CLN8-213ENST00000637156 MGAT4DA6NG13 374 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 LRRC14BA6NHZ5 514 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 TMEM114B3SHH9 223 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 GFYI3L273 518 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 FPGTO14772 594 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 GRID2O43424 1007 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 FSBPO95073 299 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 MATN4O95460 622 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 CHRNGP07510 517 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 CCR5P51681 352 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 HERVK_113P63132 956 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 ASPHQ12797 758 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 UNC50Q53HI1 259 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 GKAP1Q5VSY0 366 aaPredicted RBP20.65■□□□□ 0.9
CLN8-213ENST00000637156 KIAA0895LQ68EN5 471 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 NEK10Q6ZWH5 1172 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 FBXO39Q8N4B4 442 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 SKA2Q8WVK7 121 aaPredicted RBP20.65■□□□□ 0.9
CLN8-213ENST00000637156 SEC16BQ96JE7 1060 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 ERVK-6Q9BXR3 956 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 ZNHIT2Q9UHR6 403 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 SLC17A4Q9Y2C5 497 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 OARD1Q9Y530 152 aa20.65■□□□□ 0.9
CLN8-213ENST00000637156 GPR89AB7ZAQ6 455 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 FFAR2O15552 330 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 TGDSO95455 350 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 HOXC4P09017 264 aaPredicted RBP20.64■□□□□ 0.9
CLN8-213ENST00000637156 GPR89BP0CG08 455 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 CXCL12P48061 93 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 ABRQ12979 859 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 LRRTM4Q86VH4 590 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 TMEM145Q8NBT3 493 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 ESAMQ96AP7 390 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 CNDP1Q96KN2 507 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 SLC12A9Q9BXP2 914 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 COG4Q9H9E3 785 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 CD274Q9NZQ7 290 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 DLGAP2Q9P1A6 1054 aa20.64■□□□□ 0.9
CLN8-213ENST00000637156 LIN7AO14910 233 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms