RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 RSPH14Q9UHP6 348 aa12.45□□□□□ -0.42
CTSD-208ENST00000636843 RPL26L1Q9UNX3 145 aaKnown RBP12.45□□□□□ -0.42
CTSD-208ENST00000636843 BOD1L1Q8NFC6 3051 aa12.45□□□□□ -0.42
CTSD-208ENST00000636843 SDK2Q58EX2 2172 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 EFCAB7A8K855 629 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 RAD1O60671 282 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 SPAG6O75602 509 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 TMEM63AO94886 807 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 MAP3K6O95382 1288 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 CCNCP24863 283 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 MPSTP25325 297 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 CCT5P48643 541 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 DSC2Q02487 901 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 HHEXQ03014 270 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 FASTKD3Q14CZ7 662 aaKnown RBP12.44□□□□□ -0.42
CTSD-208ENST00000636843 PAFAH1B3Q15102 231 aaKnown RBP12.44□□□□□ -0.42
CTSD-208ENST00000636843 FNBP1LQ5T0N5 605 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 FAM129CQ86XR2 697 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 CATSPER2Q96P56 530 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 TSGA13Q96PP4 275 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 QKIQ96PU8 341 aaKnown RBP eCLIP12.44□□□□□ -0.42
CTSD-208ENST00000636843 SMIM14Q96QK8 99 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 LYSMD1Q96S90 227 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 AGAP2Q99490 1192 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 FERMT1Q9BQL6 677 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 ZPBPQ9BS86 351 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 FAM107BQ9H098 131 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 STN1Q9H668 368 aaKnown RBP12.44□□□□□ -0.42
CTSD-208ENST00000636843 OCIAD1Q9NX40 245 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 SENP1Q9P0U3 644 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 ZNHIT2Q9UHR6 403 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 TUBD1Q9UJT1 453 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 CHKBQ9Y259 395 aa12.44□□□□□ -0.42
CTSD-208ENST00000636843 TRBV23OR9-2A0A075B6M9 112 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 C5orf60A6NFR6 353 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 ZNF891A8MT65 544 aaPredicted RBP12.43□□□□□ -0.42
CTSD-208ENST00000636843 GOLGA8MH3BSY2 632 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 INPP4BO15327 924 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 MFSD11O43934 449 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 DNAJC6O75061 913 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 PRLP01236 227 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 SLC2A4P14672 509 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 LIFP15018 202 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 PPM1FP49593 454 aaPredicted RBP12.43□□□□□ -0.42
CTSD-208ENST00000636843 SEC24CP53992 1094 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 MC2RQ01718 297 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 KLHL38Q2WGJ6 581 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 CCDC38Q502W7 563 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 NCBP2-AS2Q69YL0 99 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 IYDQ6PHW0 289 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 MICALCLQ6ZW33 695 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 ARHGAP22Q7Z5H3 698 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 PALM2Q8IXS6 379 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 CCDC13Q8IYE1 715 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 BMPERQ8N8U9 685 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 MCUQ8NE86 351 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 EFHD1Q9BUP0 239 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 TDRD1Q9BXT4 1180 aaKnown RBP12.43□□□□□ -0.42
CTSD-208ENST00000636843 RMI1Q9H9A7 625 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 RAB6BQ9NRW1 208 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 RBM22Q9NW64 420 aaKnown RBP eCLIP12.43□□□□□ -0.426e-9■■■□□ 17
CTSD-208ENST00000636843 CTNNAL1Q9UBT7 734 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 PILRAQ9UKJ1 303 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 BSNQ9UPA5 3926 aa12.43□□□□□ -0.42
CTSD-208ENST00000636843 TCRBV7S3A2A0A539 114 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 RGSL1A5PLK6 1076 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 CLDN7O95471 211 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 TPSB2P20231 275 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 MX2P20592 715 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 MAP4P27816 1152 aaKnown RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 EPHA4P54764 986 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 GPX6P59796 221 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 GBE1Q04446 702 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 IHHQ14623 411 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 TPSAB1Q15661 275 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 BBS9Q3SYG4 887 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 HENMT1Q5T8I9 393 aaKnown RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 ANKS6Q68DC2 871 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 CEACAM20Q6UY09 585 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 CHST15Q7LFX5 561 aaPredicted RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 SLC9B2Q86UD5 537 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 ZNF761Q86XN6 746 aaPredicted RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 ANKMY2Q8IV38 441 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.42□□□□□ -0.42
CTSD-208ENST00000636843 AVL9Q8NBF6 648 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 FBXO36Q8NEA4 188 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 ARRDC2Q8TBH0 407 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 TFB1MQ8WVM0 346 aaKnown RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 LRRC39Q96DD0 335 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 CHMP6Q96FZ7 201 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 SLC45A3Q96JT2 553 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 OLFM3Q96PB7 478 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 SPRY4Q9C004 299 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 TRIT1Q9H3H1 467 aaKnown RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 EPB41L1Q9H4G0 881 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 FAM83DQ9H4H8 585 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 FBXO8Q9NRD0 319 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 DTLQ9NZJ0 730 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 PKD2L2Q9NZM6 624 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms