RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 LRRC45Q96CN5 670 aa16.07■□□□□ 0.16
LINC00628-201ENST00000628516 DCUN1D1Q96GG9 259 aa16.07■□□□□ 0.16
LINC00628-201ENST00000628516 CATSPER2Q96P56 530 aa16.07■□□□□ 0.16
LINC00628-201ENST00000628516 PPP1R2P1Q96PQ5 205 aa16.07■□□□□ 0.16
LINC00628-201ENST00000628516 RAB33BQ9H082 229 aa16.07■□□□□ 0.16
LINC00628-201ENST00000628516 GEMIN8Q9NWZ8 242 aaKnown RBP16.07■□□□□ 0.16
LINC00628-201ENST00000628516 IL17BQ9UHF5 180 aa16.07■□□□□ 0.16
LINC00628-201ENST00000628516 ZNF189O75820 626 aaPredicted RBP16.06■□□□□ 0.16
LINC00628-201ENST00000628516 RALBP11234 206 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 MTHFD1P11586 935 aaKnown RBP16.06■□□□□ 0.16
LINC00628-201ENST00000628516 STAT5AP42229 794 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 CCR10P46092 362 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 XIAPP98170 497 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 MSLNQ13421 630 aaPredicted RBP16.06■□□□□ 0.16
LINC00628-201ENST00000628516 IL11RAQ14626 422 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 C6orf15Q6UXA7 325 aaPredicted RBP16.06■□□□□ 0.16
LINC00628-201ENST00000628516 ARHGEF18Q6ZSZ5 1173 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 OR2L2Q8NH16 312 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 STARD8Q92502 1023 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 ULK4Q96C45 1275 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 TRIM44Q96DX7 344 aaPredicted RBP16.06■□□□□ 0.16
LINC00628-201ENST00000628516 PBKQ96KB5 322 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 C12orf66Q96MD2 445 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 INSM2Q96T92 566 aaPredicted RBP16.06■□□□□ 0.16
LINC00628-201ENST00000628516 WWP1Q9H0M0 922 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 SLC25A18Q9H1K4 315 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 FAM96AQ9H5X1 160 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 ACSL5Q9ULC5 683 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 RPS6KL1Q9Y6S9 549 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 TENM4Q6N022 2769 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 TLN1Q9Y490 2541 aaKnown RBP16.06■□□□□ 0.16
LINC00628-201ENST00000628516 SPTA1P02549 2419 aa16.06■□□□□ 0.16
LINC00628-201ENST00000628516 KIAA0754O94854 1291 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 NELFEP18615 380 aaKnown RBP16.05■□□□□ 0.16
LINC00628-201ENST00000628516 ITGALP20701 1170 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 HADHAP40939 763 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 ZNF140P52738 457 aaPredicted RBP16.05■□□□□ 0.16
LINC00628-201ENST00000628516 POLE2P56282 527 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 CDC20Q12834 499 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 BCL7AQ4VC05 210 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 DENND5AQ6IQ26 1287 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 DUS1LQ6P1R4 473 aaKnown RBP16.05■□□□□ 0.16
LINC00628-201ENST00000628516 C16orf46Q6P387 395 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 FAM71DQ8N9W8 422 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 SIDT2Q8NBJ9 832 aaKnown RBP16.05■□□□□ 0.16
LINC00628-201ENST00000628516 GALNT6Q8NCL4 622 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 COG1Q8WTW3 980 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 C1orf54Q8WWF1 131 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 UBXN4Q92575 508 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 STAMBPL1Q96FJ0 436 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 MS4A14Q96JA4 679 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 OSBPL9Q96SU4 736 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 ADNPQ9H2P0 1102 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 FEZ2Q9UHY8 353 aaPredicted RBP16.05■□□□□ 0.16
LINC00628-201ENST00000628516 LNPEPQ9UIQ6 1025 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 SNX12Q9UMY4 172 aa16.05■□□□□ 0.16
LINC00628-201ENST00000628516 ZNF106Q9H2Y7 1883 aaKnown RBP16.05■□□□□ 0.16
LINC00628-201ENST00000628516 IGHV5-51A0A0C4DH38 117 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 KLHL33A6NCF5 533 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 OR5K3A6NET4 321 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 AGAP14A8MT82 685 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 CFAP99D6REC4 459 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 CCL22O00626 93 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 LIASO43766 372 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 SPAG6O75602 509 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 POLBP06746 335 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 SLC35G4P0C7Q5 338 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 FGF5P12034 268 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 TCN2P20062 427 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 MC4RP32245 332 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 DLSTP36957 453 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 MC1RQ01726 317 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 SNX1Q13596 522 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 SIX1Q15475 284 aaPredicted RBP16.04■□□□□ 0.16
LINC00628-201ENST00000628516 PARP6Q2NL67 630 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 CYB5D1Q6P9G0 228 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 SNX20Q7Z614 316 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 PPP1R3BQ86XI6 285 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 CFAP206Q8IYR0 622 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 NXPE1Q8N323 547 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
LINC00628-201ENST00000628516 SLC35B2Q8TB61 432 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 LINC00615Q96LM1 132 aaPredicted RBP16.04■□□□□ 0.16
LINC00628-201ENST00000628516 COPS8Q99627 209 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 NAPGQ99747 312 aaPredicted RBP16.04■□□□□ 0.16
LINC00628-201ENST00000628516 MAP3K3Q99759 626 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 ARNT2Q9HBZ2 717 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 PDE7BQ9NP56 450 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 HRASLS2Q9NWW9 162 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 SMARCAL1Q9NZC9 954 aa16.04■□□□□ 0.16
LINC00628-201ENST00000628516 MRPS18BQ9Y676 258 aaKnown RBP16.04■□□□□ 0.16
LINC00628-201ENST00000628516 MAST4O15021 2626 aa16.03■□□□□ 0.16
LINC00628-201ENST00000628516 UBA6A0AVT1 1052 aaPredicted RBP16.03■□□□□ 0.16
LINC00628-201ENST00000628516 LDB2O43679 373 aa16.03■□□□□ 0.16
LINC00628-201ENST00000628516 SGTAO43765 313 aa16.03■□□□□ 0.16
LINC00628-201ENST00000628516 ATP1B2P14415 290 aaPredicted RBP16.03■□□□□ 0.16
LINC00628-201ENST00000628516 FOLR1P15328 257 aa16.03■□□□□ 0.16
LINC00628-201ENST00000628516 F8A1P23610 371 aa16.03■□□□□ 0.16
LINC00628-201ENST00000628516 OAS2P29728 719 aaKnown RBP16.03■□□□□ 0.16
LINC00628-201ENST00000628516 PRLHRP49683 370 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms