RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 RWDD3Q9Y3V2 267 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 UNC13CQ8NB66 2214 aa10.36□□□□□ -0.75
VPS11-208ENST00000621676 MYLKQ15746 1914 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 ACRV1P26436 265 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 HNRNPH1P31943 449 aaKnown RBP10.35□□□□□ -0.75
VPS11-208ENST00000621676 ACSL1P33121 698 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 DGKQP52824 942 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 ELF3P78545 371 aaPredicted RBP10.35□□□□□ -0.75
VPS11-208ENST00000621676 SATB1Q01826 763 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 INSCQ1MX18 579 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 PRR23CQ6ZRP0 262 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 ACAD11Q709F0 780 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 HEATR4Q86WZ0 1026 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 ZBTB2Q8N680 514 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 RASGEF1AQ8N9B8 481 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 TMEM159Q96B96 161 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 UBXN10Q96LJ8 280 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 KCNK12Q9HB15 430 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 SYTL2Q9HCH5 934 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 NKX1-2Q9UD57 310 aaPredicted RBP10.35□□□□□ -0.75
VPS11-208ENST00000621676 EGFL7Q9UHF1 273 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 APPL1Q9UKG1 709 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 TCF20Q9UGU0 1960 aaKnown RBP10.35□□□□□ -0.75
VPS11-208ENST00000621676 FAM186AA6NE01 2351 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 C2CD4DB7Z1M9 353 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 WNT9AO14904 365 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 SNNO75324 88 aaPredicted RBP10.35□□□□□ -0.75
VPS11-208ENST00000621676 KRT36O76013 467 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 S100BP04271 92 aaPredicted RBP10.35□□□□□ -0.75
VPS11-208ENST00000621676 ADRB3P13945 408 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 HOXB2P14652 356 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 SLC2A4P14672 509 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 GRK2P25098 689 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 HMOX2P30519 316 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 P2RY2P41231 377 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 ART3Q13508 389 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 KRT33BQ14525 404 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 ACAP2Q15057 778 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 TSNAXIP1Q2TAA8 658 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 ZNF678Q5SXM1 525 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 KDM1BQ8NB78 822 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 SH3KBP1Q96B97 665 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 GRAMD1AQ96CP6 724 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 CDRT15Q96T59 188 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 FAM129BQ96TA1 746 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 P2RY13Q9BPV8 354 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 PCDHAC1Q9H158 963 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 AKTIPQ9H8T0 292 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 SLAMF8Q9P0V8 285 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 HSFX1Q9UBD0 423 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 STOML2Q9UJZ1 356 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 ASF1AQ9Y294 204 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 CROCCQ5TZA2 2017 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 MYOCOSA0A1B0GUC4 107 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 LOC730098B7Z3J9 87 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 HTRA2O43464 458 aaPredicted RBP10.35□□□□□ -0.75
VPS11-208ENST00000621676 NRP2O60462 931 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 HIST1H2AGP0C0S8 130 aaPredicted RBP10.35□□□□□ -0.75
VPS11-208ENST00000621676 GM2AP17900 193 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 HIST1H2ADP20671 130 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 AK4P27144 223 aaPredicted RBP10.35□□□□□ -0.75
VPS11-208ENST00000621676 PTGER3P43115 390 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 UBE3AQ05086 875 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 PTCHD3Q3KNS1 767 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 LETMD1Q6P1Q0 360 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 SYVN1Q86TM6 617 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 CLEC4FQ8N1N0 589 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 CCL4L1Q8NHW4 92 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 CXorf40AQ8TE69 158 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 TWIST2Q8WVJ9 160 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 TSACCQ96A04 125 aaPredicted RBP10.35□□□□□ -0.75
VPS11-208ENST00000621676 HIST1H2AHQ96KK5 128 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 TSSK3Q96PN8 268 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 HIST1H2AJQ99878 128 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 H2AFJQ9BTM1 129 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 DRC3Q9H069 523 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 DENND2DQ9H6A0 471 aaPredicted RBP10.35□□□□□ -0.75
VPS11-208ENST00000621676 PKD2L2Q9NZM6 624 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 DPP7Q9UHL4 492 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 RAP2CQ9Y3L5 183 aa10.35□□□□□ -0.75
VPS11-208ENST00000621676 A0A087X1B8 175 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 UBDO15205 165 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 APODP05090 189 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 PCNAP12004 261 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 PPP1R8Q12972 351 aaKnown RBP10.34□□□□□ -0.75
VPS11-208ENST00000621676 PTGR1Q14914 329 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 HNRNPA1L2Q32P51 320 aaKnown RBP10.34□□□□□ -0.75
VPS11-208ENST00000621676 ITPRIPL2Q3MIP1 535 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 SLC30A9Q6PML9 568 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 KIAA0408Q6ZU52 694 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 CNTN4Q8IWV2 1026 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 CPA6Q8N4T0 437 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 AADATQ8N5Z0 425 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 FAM13CQ8NE31 585 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 OR4F6Q8NGB9 312 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 AGAP11Q8TF27 550 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 TEX37Q96LM6 180 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 C7orf26Q96N11 449 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 FOXQ1Q9C009 403 aa10.34□□□□□ -0.75
VPS11-208ENST00000621676 TMEM245Q9H330 911 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms