RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 OR10H4Q8NGA5 316 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 VNN3Q9NY84 501 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 SPATA31A3Q5VYP0 1347 aa12.5□□□□□ -0.41
TCF4-248ENST00000616053 USP12O75317 370 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 ZC3H10Q96K80 434 aaKnown RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 RC3H2Q9HBD1 1191 aaKnown RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 OR2AT4A6NND4 320 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 LGALS2P05162 132 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 FHP07954 510 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 PAEPP09466 180 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 FAM189A2Q15884 450 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 GPR139Q6DWJ6 353 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 LRIG3Q6UXM1 1119 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 ZC3HC1Q86WB0 502 aaKnown RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 SAMD14Q8IZD0 417 aaPredicted RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 HORMAD2Q8N7B1 307 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 IFT27Q9BW83 186 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 GLYATL1P3A0A0U1RQE8 302 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 A6NL46 340 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 GSG1L2A8MUP6 293 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 AP2A1O95782 977 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 CALB2P22676 271 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 SLC26A5P58743 744 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 SCIMPQ6UWF3 145 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 GFM1Q96RP9 751 aaKnown RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 IL22Q9GZX6 179 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 CDHR2Q9BYE9 1310 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 DNMBPQ6XZF7 1577 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 OR2AG2A6NM03 316 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 E7ENQ6 273 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 CCNB1P14635 433 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 RPS3P23396 243 aaKnown RBP eCLIP12.49□□□□□ -0.41
TCF4-248ENST00000616053 ERN2Q76MJ5 926 aaKnown RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 CLVS1Q8IUQ0 354 aaPredicted RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 RNF148Q8N7C7 305 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 SPRYD4Q8WW59 207 aaPredicted RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 RIOK2Q9BVS4 552 aaKnown RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 HES7Q9BYE0 225 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 NMUR1Q9HB89 426 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 LYARQ9NX58 379 aaKnown RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 NDUFA13Q9P0J0 144 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 WASF2Q9Y6W5 498 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 PEG3Q9GZU2 1588 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 A0A087WUU8 490 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 TP53I11O14683 189 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 MT-CYBP00156 380 aaPredicted RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 C1RP00736 705 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 ZNF84P51523 738 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 PSPHP78330 225 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 GORASP1Q9BQQ3 440 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 SEMA6AQ9H2E6 1030 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 DNAAF2Q9NVR5 837 aaKnown RBP12.49□□□□□ -0.41
TCF4-248ENST00000616053 STK17BO94768 372 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 AQP1P29972 269 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 TPTEP56180 551 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 SLC6A3Q01959 620 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 PDE7BQ9NP56 450 aa12.49□□□□□ -0.41
TCF4-248ENST00000616053 TEX13DA0A0J9YY54 714 aaPredicted RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 IQCF5A8MTL0 148 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 TRUB2O95900 331 aaKnown RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 CORO1AP31146 461 aaKnown RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 PCID2Q5JVF3 399 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 THAP2Q9H0W7 228 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 FBRSL1Q9HCM7 1045 aaKnown RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 SLC7A11Q9UPY5 501 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 MAP3K1Q13233 1512 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 A0A1W2PPL8 197 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 A0A1W2PQ67 120 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 PFKLP17858 780 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 LSM3P62310 102 aaKnown RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 FAM76BQ5HYJ3 339 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 C3orf67Q6ZVT6 689 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 GPR142Q7Z601 462 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 TCAIMQ8N3R3 496 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 DNAJB14Q8TBM8 379 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 ASB6Q9NWX5 421 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 SUSD2Q9UGT4 822 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 PCDHGA8Q9Y5G5 932 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 M0R036 132 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 CST1P01037 141 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 LHCGRP22888 699 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 S100A7P31151 101 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 ITIH4Q14624 930 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 ZNF676Q8N7Q3 588 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 FCRL2Q96LA5 508 aaPredicted RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 CNOT11Q9UKZ1 510 aaKnown RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 POFUT2Q9Y2G5 429 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 FTCDNL1E5RQL4 147 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 CTSKP43235 329 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 NAA20P61599 178 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 TNFAIP8L3Q5GJ75 292 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 TMEM225Q6GV28 225 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 CYP2U1Q7Z449 544 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 OR52K2Q8NGK3 314 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 MMABQ96EY8 250 aaPredicted RBP12.48□□□□□ -0.41
TCF4-248ENST00000616053 CCSER2Q9H7U1 834 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 TRPV5Q9NQA5 729 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 HPF1Q9NWY4 346 aa12.48□□□□□ -0.41
TCF4-248ENST00000616053 M0R2N6 131 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms