RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 LURAP1LQ8IV03 231 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 TBC1D10CQ8IV04 446 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MARK4Q96L34 752 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 USB1Q9BQ65 265 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF251Q9BRH9 671 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CHRAC1Q9NRG0 131 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 SNX15Q9NRS6 342 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 HSPE1-MOB4S4R3N1 261 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PP2D1A8MPX8 630 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CSF2RAP15509 400 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 TXNL4AP83876 142 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 POU4F2Q12837 409 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 BMPR2Q13873 1038 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 GRM4Q14833 912 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FCRLBQ6BAA4 426 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CHSY3Q70JA7 882 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 C7orf43Q8WVR3 580 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PMM1Q92871 262 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 RANBP9Q96S59 729 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 LGMNQ99538 433 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FEM1AQ9BSK4 669 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PITHD1Q9GZP4 211 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 TBC1D24Q9ULP9 559 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FAM95CA0A1B0GW59 222 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 LIASO43766 372 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 VNN2O95498 520 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PAK4O96013 591 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MAGEA11P43364 429 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CAP1Q01518 475 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CACNB1Q02641 598 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PTP4A2Q12974 167 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 POU4F3Q15319 338 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 OR4Q3Q8NH05 313 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 AZIN2Q96A70 460 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MED15Q96RN5 788 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 AMNQ9BXJ7 453 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MAN1C1Q9NR34 630 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 SUV39H1O43463 412 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CYP1A1P04798 512 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 GM2AP17900 193 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MAT2AP31153 395 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MTMR2Q13614 643 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 GPR68Q15743 365 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FOXB2Q5VYV0 432 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ANKK1Q8NFD2 765 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 NT5DC2Q9H857 520 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM8AQ9HCN3 771 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 NKIRAS2Q9NYR9 191 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PTGFRNQ9P2B2 879 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 OAS3Q9Y6K5 1087 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ARFGEF1Q9Y6D6 1849 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 RFXAPO00287 272 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 KCNJ13O60928 360 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ADRB1P08588 477 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 RAP2AP10114 183 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 GPR143P51810 404 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 NAGLUP54802 743 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FOXM1Q08050 763 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 GPR19Q15760 415 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 DUSP7Q16829 419 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 CRTC1Q6UUV9 634 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF367Q7RTV3 350 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF561Q8N587 486 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ZBTB44Q8NCP5 570 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 GIMAP1Q8WWP7 306 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 SMURF2Q9HAU4 748 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ASH2LQ9UBL3 628 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PPIEQ9UNP9 301 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MEIOCA2RUB1 952 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ADAM23O75077 832 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MLYCDO95822 493 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 NR2F6P10588 404 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PTPN7P35236 360 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 LIPEQ05469 1076 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PON3Q15166 354 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ALKBH2Q6NS38 261 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ANKRD54Q6NXT1 300 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MOSPD2Q8NHP6 518 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 EBNA1BP2Q99848 306 aaKnown RBP4.89□□□□□ -1.63
VPS13D-213ENST00000613099 NLNQ9BYT8 704 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 SALL1Q9NSC2 1324 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FXYD6-FXYD2A0A087WZ82 144 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 UGT2B17O75795 530 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 T-ENOLP0DO92 83 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 GPC1P35052 558 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ALDH3B2P48448 385 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PLCH1Q4KWH8 1693 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MIIPQ5JXC2 388 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FAM180BQ6P0A1 224 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 BRAT1Q6PJG6 821 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PTCHD1Q96NR3 888 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 FXYD6Q9H0Q3 95 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 DPEP3Q9H4B8 488 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 SPHK1Q9NYA1 384 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 ENPP5Q9UJA9 477 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PCDHGB5Q9Y5G0 923 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 PCDHA11Q9Y5I1 949 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 A0A075B6Q4 140 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 NPIPA7E9PJI5 369 aa4.89□□□□□ -1.63
VPS13D-213ENST00000613099 MID1O15344 667 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms