RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 PEX12O00623 359 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 LDB2O43679 373 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 HLA-DPA1P20036 260 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 AGXTP21549 392 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 PREPP48147 710 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 CTSCP53634 463 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 ZBTB17Q13105 803 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 LLGL1Q15334 1064 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 CCDC70Q6NSX1 233 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 MCEMP1Q8IX19 187 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 KCTD6Q8NC69 237 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 OR1L3Q8NH93 324 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 C12orf66Q96MD2 445 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 DPH2Q9BQC3 489 aaPredicted RBP16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 DHRS4Q9BTZ2 278 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 CEP41Q9BYV8 373 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 XPO4Q9C0E2 1151 aaKnown RBP16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 WWP1Q9H0M0 922 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 ISCUQ9H1K1 167 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 SYTL2Q9HCH5 934 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 SLC24A2Q9UI40 661 aa16.74■□□□□ 0.27
CSNK1E-215ENST00000612795 OR2AG2A6NM03 316 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 PRSS44E7EML9 344 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 MAP3K7O43318 606 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 IGHEP01854 428 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 POLR2CP19387 275 aaPredicted RBP16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 PRKCIP41743 596 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 ARSEP51690 589 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 IFI35P80217 286 aaPredicted RBP16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 ZRSR2Q15696 482 aaKnown RBP16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 DCAF10Q5QP82 559 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 LDLRAP1Q5SW96 308 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 E4F1Q66K89 784 aaPredicted RBP16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 TMEM220Q6QAJ8 160 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 Q6ZS92 163 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 CUZD1Q86UP6 607 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 NT5DC3Q86UY8 548 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 MAP7D3Q8IWC1 876 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 CNTD1Q8N815 330 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 RASGEF1AQ8N9B8 481 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 IMP4Q96G21 291 aaKnown RBP16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 SRPK1Q96SB4 655 aaKnown RBP16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 INSM2Q96T92 566 aaPredicted RBP16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 BARD1Q99728 777 aaKnown RBP16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 ZNF552Q9H707 407 aaPredicted RBP16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 KIR3DX1Q9H7L2 352 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 C1GALT1Q9NS00 363 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 FAM8A1Q9UBU6 413 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 SERTAD3Q9UJW9 196 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 POMT2Q9UKY4 750 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 OSGIN2Q9Y236 505 aa16.73■□□□□ 0.27
CSNK1E-215ENST00000612795 GSAPA4D1B5 854 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 LRRC10BA6NIK2 292 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 E7EQ34 232 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 AURKAO14965 403 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 ZG16O60844 167 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 HBQ1P09105 142 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 SLC35G4P0C7Q5 338 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 ATXN8OSP0DMR3 200 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 CA5AP35218 305 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 HADHAP40939 763 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 FOLR3P41439 243 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 PPIDQ08752 370 aaKnown RBP16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 KRT33BQ14525 404 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 PDK2Q15119 407 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 PPP2R5EQ16537 467 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 ATP13A4Q4VNC1 1196 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 ZNF789Q5FWF6 425 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 CRB2Q5IJ48 1285 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 ZFYVE27Q5T4F4 411 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 SP5Q6BEB4 398 aaPredicted RBP16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 APTXQ7Z2E3 356 aaKnown RBP16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 ZFPM2Q8WW38 1151 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 AGAP3Q96P47 875 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 C17orf62Q9BQA9 187 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 THAP2Q9H0W7 228 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 AIPL1Q9NZN9 384 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 GPN3Q9UHW5 284 aaPredicted RBP16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 PTRH2Q9Y3E5 179 aaKnown RBP16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 SPO11Q9Y5K1 396 aa16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 DNMT3AQ9Y6K1 912 aaPredicted RBP16.72■□□□□ 0.27
CSNK1E-215ENST00000612795 MYO1FO00160 1098 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 MATN2O00339 956 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 NDST3O95803 873 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 SKILP12757 684 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 AKT1P31749 480 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 SPAM1P38567 509 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 LMAN1P49257 510 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 AP1B1Q10567 949 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 SLC10A2Q12908 348 aaPredicted RBP16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 GSE1Q14687 1217 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 SSPNQ14714 243 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 FAM182AQ5T1J6 154 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 MLIPQ5VWP3 458 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 METRNLQ641Q3 311 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 FAM151BQ6UXP7 276 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 B4GALNT4Q76KP1 1039 aa16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 ZC3H18Q86VM9 953 aaKnown RBP16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 BEND7Q8N7W2 519 aaPredicted RBP16.71■□□□□ 0.27
CSNK1E-215ENST00000612795 DDHD1Q8NEL9 900 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms