RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 UQCRHP07919 91 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 INHBAP08476 426 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 MSH2P43246 934 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 CTSCP53634 463 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 SRP54P61011 504 aaKnown RBP11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 PLOD1Q02809 727 aaPredicted RBP11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 PPARDQ03181 441 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 DNAJC3Q13217 504 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 ALG11Q2TAA5 492 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 ZNF658BQ4V348 819 aaPredicted RBP11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 CTSL3PQ5NE16 218 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 CNSTQ6PJW8 725 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 TMEM220Q6QAJ8 160 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 LRIG3Q6UXM1 1119 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 MICALCLQ6ZW33 695 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 CCDC91Q7Z6B0 441 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 C11orf96Q7Z7L8 435 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 CROCCP2Q86T23 111 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 LRRTM4Q86VH4 590 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 GALNT13Q8IUC8 556 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 RIBC1Q8N443 379 aaPredicted RBP11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 OR1E3Q8WZA6 343 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 ISL2Q96A47 359 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 SGF29Q96ES7 293 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 VPS39Q96JC1 886 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 GPR22Q99680 433 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 TSSK1BQ9BXA7 367 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 CCDC68Q9H2F9 335 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 EURLQ9NYK6 297 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 SUFUQ9UMX1 484 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 TMEM98Q9Y2Y6 226 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 PCDHGB2Q9Y5G2 931 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 PRSS21Q9Y6M0 314 aa11.45□□□□□ -0.58
CHMP2A-207ENST00000600804 A0A087WV48 116 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 UBA6A0AVT1 1052 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 EIF3FO00303 357 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 KPNA5O15131 536 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 CDH16O75309 829 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 FAM155BO75949 473 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 TNFP01375 233 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 FTH1P02794 183 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 GCAP28676 217 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 SKIV2L2P42285 1042 aaKnown RBP11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 HNRNPKP61978 463 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 POU4F1Q01851 419 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 SMAD1Q15797 465 aaKnown RBP11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 ZNF648Q5T619 568 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 LGSNQ5TDP6 509 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 FAM45BPQ6NSW5 357 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 ZNF549Q6P9A3 640 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 FBXO38Q6PIJ6 1188 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 TAOK1Q7L7X3 1001 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 CLDN19Q8N6F1 224 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 OR2L2Q8NH16 312 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 FAM45AQ8TCE6 357 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 GPBAR1Q8TDU6 330 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 DCAKDQ8WVC6 231 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 MTBPQ96DY7 904 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 CCDC97Q96F63 343 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 PDXPQ96GD0 296 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 OR2M4Q96R27 311 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 CCM2Q9BSQ5 444 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 VIPAS39Q9H9C1 493 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 POPDC3Q9HBV1 291 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 SLC17A6Q9P2U8 582 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 GULP1Q9UBP9 304 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 PNMA8BQ9ULN7 279 aaPredicted RBP11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 CRYL1Q9Y2S2 319 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 MED16Q9Y2X0 877 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 VWA7Q9Y334 891 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 IKBKGQ9Y6K9 419 aa11.44□□□□□ -0.58
CHMP2A-207ENST00000600804 NAV2Q8IVL1 2488 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 HMX2A2RU54 273 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 MGAT4DA6NG13 374 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 H3BM21 787 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 PIAS1O75925 651 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 KRT38O76015 456 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 SHBGP04278 402 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 ITGA2BP08514 1039 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 VCLP18206 1134 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 FDXRP22570 491 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 ITPKBP27987 946 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 FMO4P31512 558 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 CSRP3P50461 194 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 TIAL1Q01085 375 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 IL9RQ01113 521 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 RPA4Q13156 261 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 GBX1Q14549 363 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 CASP8Q14790 479 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 EFTUD2Q15029 972 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 ZKSCAN8Q15776 578 aaPredicted RBP11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 PTRHD1Q6GMV3 140 aaKnown RBP11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 UGT3A1Q6NUS8 523 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 DOK6Q6PKX4 331 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 DHRS13Q6UX07 377 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 TIFABQ6ZNK6 161 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 AMZ2Q86W34 360 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 TRAPPC5Q8IUR0 188 aa11.43□□□□□ -0.58
CHMP2A-207ENST00000600804 PHACTR4Q8IZ21 702 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms