RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CDYLQ9Y232 598 aa17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 MRPS17Q9Y2R5 130 aaKnown RBP17.33■□□□□ 0.37
SHKBP1-224ENST00000600718 TCRBV21S2A2A0A5A6 115 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 NCF1BA6NI72 391 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 NCF1CA8MVU1 366 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 ZNF195O14628 629 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 SLC16A5O15375 505 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 FFAR2O15552 330 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 SIX3O95343 332 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 C8GP07360 202 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 NCF1P14598 390 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 EEF1DP29692 281 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 FGL2Q14314 439 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 LRRC32Q14392 662 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 HEATR4Q86WZ0 1026 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 GBP7Q8N8V2 638 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 TP53I13Q8NBR0 393 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 PDPRQ8NCN5 879 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 LINC00615Q96LM1 132 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 TEX101Q9BY14 249 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 POLMQ9NP87 494 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 MBNL1Q9NR56 388 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 UTP6Q9NYH9 597 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 ADAMTS6Q9UKP5 1117 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 SORCS3Q9UPU3 1222 aa17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 APOBEC2Q9Y235 224 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 TNPO3Q9Y5L0 923 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-224ENST00000600718 MYO10Q9HD67 2058 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 CHURC1-FNTBB4DL54 471 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 MATN2O00339 956 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 LILRB5O75023 590 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 ENO2P09104 434 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 VCLP18206 1134 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 GABRG2P18507 467 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 TRIM23P36406 574 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 CDK3Q00526 305 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 SYTL3Q4VX76 610 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 CDKL4Q5MAI5 379 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 ZNF687Q8N1G0 1237 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 FITM2Q8N6M3 262 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 ASB11Q8WXH4 323 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 TMEM159Q96B96 161 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 FAR2Q96K12 515 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 OSBPL6Q9BZF3 934 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 COG4Q9H9E3 785 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 LMAN1LQ9HAT1 526 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 ARHGEF3Q9NR81 526 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 WNT16Q9UBV4 365 aa17.32■□□□□ 0.36
SHKBP1-224ENST00000600718 SLC5A10A0PJK1 596 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 PRR23AA6NEV1 266 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 HDAC3O15379 428 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 RPS17P08708 135 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 ZNF8P17098 575 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 DGKEP52429 567 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 INPP5AQ14642 412 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 IRF4Q15306 451 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 HABP4Q5JVS0 413 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 CUZD1Q86UP6 607 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 TRAPPC5Q8IUR0 188 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 VRK3Q8IV63 474 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 AFAP1L2Q8N4X5 818 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 GLMNQ92990 594 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 SHDQ96IW2 340 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 SLC12A9Q9BXP2 914 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 TRIM54Q9BYV2 358 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 SHCBP1LQ9BZQ2 653 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 PTBP2Q9UKA9 531 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 C17orf113A0A1B0GUU1 675 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 LRRC14BA6NHZ5 514 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 H0YHG0 523 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 IDH3AP50213 366 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 CLCQ05315 142 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 SP140Q13342 867 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 PCBP2Q15366 365 aaKnown RBP eCLIP17.31■□□□□ 0.366e-9■■■■■ 40.7
SHKBP1-224ENST00000600718 SH2D4BQ5SQS7 431 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 SULT1C3Q6IMI6 304 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 EPGNQ6UW88 154 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 UBE2R2Q712K3 238 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 RPS27LQ71UM5 84 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 MAVSQ7Z434 540 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 FAM124AQ86V42 546 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 AGR3Q8TD06 166 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 ZNF483Q8TF39 744 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 SKA2Q8WVK7 121 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 DLG3Q92796 817 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 KLK6Q92876 244 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 RILPQ96NA2 401 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 PARVBQ9HBI1 364 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 ITM2CQ9NQX7 267 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 F5P12259 2224 aa17.31■□□□□ 0.36
SHKBP1-224ENST00000600718 TMEM202A6NGA9 273 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 GFYI3L273 518 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 LIN7AO14910 233 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 GRID2O43424 1007 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 MAPK9P45984 424 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 AGTR2P50052 363 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 TPMTP51580 245 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 CDH13P55290 713 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 STARD6P59095 220 aa17.3■□□□□ 0.36
SHKBP1-224ENST00000600718 CDKL1Q00532 357 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms