RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 GLMNQ92990 594 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 TSPAN17Q96FV3 270 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 GPR21Q99679 349 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 DUSP23Q9BVJ7 150 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 LATS2Q9NRM7 1088 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 RXFP3Q9NSD7 469 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 NLGN3Q9NZ94 848 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 GULP1Q9UBP9 304 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 TBC1D29Q9UFV1 150 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 SLC39A10Q9ULF5 831 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 DHRS7Q9Y394 339 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 ST14Q9Y5Y6 855 aa13.36□□□□□ -0.27
VMP1-210ENST00000589823 OTOGLQ3ZCN5 2332 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 UQCRHLA0A096LP55 91 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 SLC5A10A0PJK1 596 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 PRR19A6NJB7 356 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 C4orf47A7E2U8 309 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 B4DGG1 531 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 FLRT2O43155 660 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 KRT37O76014 449 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 UQCRHP07919 91 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 SLC35G4P0C7Q5 338 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 FDXRP22570 491 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 RPL10P27635 214 aaKnown RBP13.35□□□□□ -0.27
VMP1-210ENST00000589823 GRK6P43250 576 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 PREPP48147 710 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 CLCN7P51798 805 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 ZNF658BQ4V348 819 aaPredicted RBP13.35□□□□□ -0.27
VMP1-210ENST00000589823 BEND6Q5SZJ8 279 aaPredicted RBP13.35□□□□□ -0.27
VMP1-210ENST00000589823 MROH9Q5TGP6 573 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 ADGRD1Q6QNK2 874 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 WASH2PQ6VEQ5 465 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 ZBTB2Q8N680 514 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 LILRA3Q8N6C8 439 aaPredicted RBP13.35□□□□□ -0.27
VMP1-210ENST00000589823 OR4C6Q8NH72 309 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 ZDHHC1Q8WTX9 485 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 DCAKDQ8WVC6 231 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 INPP5DQ92835 1189 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 DHRS4Q9BTZ2 278 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 WWP1Q9H0M0 922 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 WASH6PQ9NQA3 447 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 PRDM8Q9NQV8 689 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 PSMC3IPQ9P2W1 217 aaPredicted RBP13.35□□□□□ -0.27
VMP1-210ENST00000589823 GALPQ9UBC7 116 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 PSMD13Q9UNM6 376 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 PLAAQ9Y263 795 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 MED16Q9Y2X0 877 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 KNL1Q8NG31 2342 aa13.35□□□□□ -0.27
VMP1-210ENST00000589823 IQANK1A0A1B0GTG1 560 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 SMIM23A6NLE4 172 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 OR5K4A6NMS3 321 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 IFRD1O00458 451 aaPredicted RBP13.34□□□□□ -0.27
VMP1-210ENST00000589823 GDF9O60383 454 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 GPC4O75487 556 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 TCEA3O75764 348 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 SNRPAP09012 282 aaKnown RBP13.34□□□□□ -0.27
VMP1-210ENST00000589823 F3P13726 295 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 STMN1P16949 149 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 RGS4P49798 205 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 TAS2R39P59534 338 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 BMPR2Q13873 1038 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 C6orf132Q5T0Z8 1188 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 AGAP9Q5VTM2 703 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 ZCCHC8Q6NZY4 707 aaKnown RBP13.34□□□□□ -0.27
VMP1-210ENST00000589823 ABRAXAS1Q6UWZ7 409 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 PIM3Q86V86 326 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 EID2Q8N6I1 236 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 ACVR1CQ8NER5 493 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 OR2W6PQ8NHA6 318 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 CD200R1Q8TD46 325 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 SETD7Q8WTS6 366 aaKnown RBP13.34□□□□□ -0.27
VMP1-210ENST00000589823 SKA2Q8WVK7 121 aaPredicted RBP13.34□□□□□ -0.27
VMP1-210ENST00000589823 MTBPQ96DY7 904 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 SLC30A3Q99726 388 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 OLFM1Q99784 485 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 ROPN1BQ9BZX4 212 aaPredicted RBP13.34□□□□□ -0.27
VMP1-210ENST00000589823 CAB39LQ9H9S4 337 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 ROPN1Q9HAT0 212 aaPredicted RBP13.34□□□□□ -0.27
VMP1-210ENST00000589823 POPDC3Q9HBV1 291 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 SYTL2Q9HCH5 934 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 SIRPGQ9P1W8 387 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 PCOLCE2Q9UKZ9 415 aa13.34□□□□□ -0.27
VMP1-210ENST00000589823 TDRD6O60522 2096 aaKnown RBP13.33□□□□□ -0.27
VMP1-210ENST00000589823 KIR2DS5A0A0G2JLQ3 304 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 A0A0G2JNG1 304 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.33□□□□□ -0.28
VMP1-210ENST00000589823 TLDC2A0PJX2 215 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 KIR2DS3K7RE56 304 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 RASGRF2O14827 1237 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 SLCO2B1O94956 709 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 GIMD1P0DJR0 217 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 CBSLP0DN79 551 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 ENO3P13929 434 aaPredicted RBP13.33□□□□□ -0.28
VMP1-210ENST00000589823 H2AFXP16104 143 aaPredicted RBP13.33□□□□□ -0.28
VMP1-210ENST00000589823 GCAP28676 217 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 CRABP2P29373 138 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 PDHA2P29803 388 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 ATP5DP30049 168 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 CBSP35520 551 aa13.33□□□□□ -0.28
VMP1-210ENST00000589823 SLCO1A2P46721 670 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms