RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 OPTCQ9UBM4 332 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 POLG2Q9UHN1 485 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 G3BP2Q9UN86 482 aaKnown RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 POMPQ9Y244 141 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 MTF2Q9Y483 593 aaPredicted RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 A0A0U1RQS6 177 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 MEI4A8MW99 385 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 A8MX80 341 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 C1QTNF3-AMACRE9PGA6 284 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 SLC28A1O00337 649 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 WNT9AO14904 365 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 STK16O75716 305 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 HGFP14210 728 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 EPB42P16452 691 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 TSPAN8P19075 237 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 GPX3P22352 226 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 PTDSS1P48651 473 aaKnown RBP10.21□□□□□ -0.77
VPS25-203ENST00000589520 RPIAP49247 311 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 ERVK-8P63133 956 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 CREB5Q02930 508 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 EMX2Q04743 252 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 FOXM1Q08050 763 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 FCHO2Q0JRZ9 810 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 TRAP1Q12931 704 aaKnown RBP10.21□□□□□ -0.77
VPS25-203ENST00000589520 LRP8Q14114 963 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 ELAVL3Q14576 367 aaKnown RBP10.21□□□□□ -0.77
VPS25-203ENST00000589520 RCN1Q15293 331 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 KIF19Q2TAC6 998 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 ATP6AP1LQ52LC2 224 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 PIGGQ5H8A4 983 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 RARS2Q5T160 578 aaKnown RBP10.21□□□□□ -0.77
VPS25-203ENST00000589520 HENMT1Q5T8I9 393 aaKnown RBP10.21□□□□□ -0.77
VPS25-203ENST00000589520 FAM46CQ5VWP2 391 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 LIPIQ6XZB0 460 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 RPS27LQ71UM5 84 aaKnown RBP10.21□□□□□ -0.77
VPS25-203ENST00000589520 GOLGA7Q7Z5G4 137 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 ADGRD2Q7Z7M1 963 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 TMEM126BQ8IUX1 230 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 YAF2Q8IY57 180 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 FAM9CQ8IZT9 166 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 CLDN19Q8N6F1 224 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 METTL6Q8TCB7 284 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 MCOLN3Q8TDD5 553 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 ZNF514Q96K75 400 aaPredicted RBP10.21□□□□□ -0.77
VPS25-203ENST00000589520 PPP3R2Q96LZ3 170 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 NSUN5Q96P11 429 aaKnown RBP10.21□□□□□ -0.77
VPS25-203ENST00000589520 LRRC3BQ96PB8 259 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 CDRT15Q96T59 188 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 SLC29A3Q9BZD2 475 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 BRINP2Q9C0B6 783 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 ZCCHC2Q9C0B9 1178 aaKnown RBP10.21□□□□□ -0.77
VPS25-203ENST00000589520 SLC32A1Q9H598 525 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 IPPKQ9H8X2 491 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 S100A14Q9HCY8 104 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 TNFRSF12AQ9NP84 129 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 DYRK4Q9NR20 520 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 WWOXQ9NZC7 414 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 NKX1-2Q9UD57 310 aaPredicted RBP10.21□□□□□ -0.77
VPS25-203ENST00000589520 TRPS1Q9UHF7 1281 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 CROTQ9UKG9 612 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 CDH7Q9ULB5 785 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 PPM1HQ9ULR3 514 aa10.21□□□□□ -0.77
VPS25-203ENST00000589520 GRXCR1A8MXD5 290 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 GFYI3L273 518 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 TRIM38O00635 465 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 PPP6CO00743 305 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 MRASO14807 208 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 ANGPT2O15123 496 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 TAPBPO15533 448 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 RGS14O43566 566 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 CTSLP07711 333 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 ELFN1P0C7U0 828 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 LINC00032P0C843 101 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 ITGB6P18564 788 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 HMOX2P30519 316 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 AKT1P31749 480 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 CCR7P32248 378 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 MMP12P39900 470 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 VIPR2P41587 438 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 AGTR2P50052 363 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 FOXA1P55317 472 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 PSME3P61289 254 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 B4GALNT1Q00973 533 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 RALGDSQ12967 914 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 RUNX3Q13761 415 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 SHHQ15465 462 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 ZNF423Q2M1K9 1284 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 GGTA1PQ4G0N0 100 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 TMEM52BQ4KMG9 183 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 FNDC3BQ53EP0 1204 aaKnown RBP10.2□□□□□ -0.78
VPS25-203ENST00000589520 SAMD4BQ5PRF9 694 aaKnown RBP10.2□□□□□ -0.78
VPS25-203ENST00000589520 ATAT1Q5SQI0 421 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 REP15Q6BDI9 236 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 FBXL19Q6PCT2 694 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 UBE2R2Q712K3 238 aaPredicted RBP10.2□□□□□ -0.78
VPS25-203ENST00000589520 LRRC70Q7Z2Q7 622 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 HSD11B1LQ7Z5J1 315 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 KBTBD6Q86V97 674 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 MINDY1Q8N5J2 469 aa10.2□□□□□ -0.78
VPS25-203ENST00000589520 C12orf76Q8N812 135 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms