RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 OTX2P32243 289 aa13□□□□□ -0.33
COPS3-218ENST00000584216 SPAM1P38567 509 aa13□□□□□ -0.33
COPS3-218ENST00000584216 PREPP48147 710 aa13□□□□□ -0.33
COPS3-218ENST00000584216 KPNA2P52292 529 aaKnown RBP13□□□□□ -0.33
COPS3-218ENST00000584216 AP1B1Q10567 949 aa13□□□□□ -0.33
COPS3-218ENST00000584216 ABRQ12979 859 aa13□□□□□ -0.33
COPS3-218ENST00000584216 NFE2L1Q14494 772 aa13□□□□□ -0.33
COPS3-218ENST00000584216 SSPNQ14714 243 aa13□□□□□ -0.33
COPS3-218ENST00000584216 PPP2R5EQ16537 467 aa13□□□□□ -0.33
COPS3-218ENST00000584216 LCN10Q6JVE6 187 aa13□□□□□ -0.33
COPS3-218ENST00000584216 TMEM220Q6QAJ8 160 aa13□□□□□ -0.33
COPS3-218ENST00000584216 RBM43Q6ZSC3 357 aaKnown RBP13□□□□□ -0.33
COPS3-218ENST00000584216 MRGPREQ86SM8 312 aa13□□□□□ -0.33
COPS3-218ENST00000584216 GALNT16Q8N428 558 aa13□□□□□ -0.33
COPS3-218ENST00000584216 RASGEF1AQ8N9B8 481 aa13□□□□□ -0.33
COPS3-218ENST00000584216 DDHD1Q8NEL9 900 aa13□□□□□ -0.33
COPS3-218ENST00000584216 TRAF3IP1Q8TDR0 691 aaPredicted RBP13□□□□□ -0.33
COPS3-218ENST00000584216 COG1Q8WTW3 980 aa13□□□□□ -0.33
COPS3-218ENST00000584216 LRRN4Q8WUT4 740 aa13□□□□□ -0.33
COPS3-218ENST00000584216 MARVELD3Q96A59 401 aa13□□□□□ -0.33
COPS3-218ENST00000584216 AGAP3Q96P47 875 aa13□□□□□ -0.33
COPS3-218ENST00000584216 BPIFA1Q9NP55 256 aa13□□□□□ -0.33
COPS3-218ENST00000584216 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
COPS3-218ENST00000584216 POMT2Q9UKY4 750 aa13□□□□□ -0.33
COPS3-218ENST00000584216 TMPRSS11EQ9UL52 423 aa13□□□□□ -0.33
COPS3-218ENST00000584216 SRPK3Q9UPE1 567 aa13□□□□□ -0.33
COPS3-218ENST00000584216 CFAP20Q9Y6A4 193 aaKnown RBP13□□□□□ -0.33
COPS3-218ENST00000584216 ABCA12Q86UK0 2595 aa13□□□□□ -0.33
COPS3-218ENST00000584216 HEATR9A2RTY3 570 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 SLC9B1P1A6NJY1 282 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 OR2AG2A6NM03 316 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 E7EQ34 232 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 F5H423 210 aaPredicted RBP12.99□□□□□ -0.33
COPS3-218ENST00000584216 CAPN1P07384 714 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 SKILP12757 684 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 MSH3P20585 1137 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 PBLDP30039 288 aaPredicted RBP12.99□□□□□ -0.33
COPS3-218ENST00000584216 AKT1P31749 480 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 GLRBP48167 497 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 SLC10A2Q12908 348 aaPredicted RBP12.99□□□□□ -0.33
COPS3-218ENST00000584216 GSE1Q14687 1217 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 PDK1Q15118 436 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 DCAF10Q5QP82 559 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 PRAMEF17Q5VTA0 474 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 E4F1Q66K89 784 aaPredicted RBP12.99□□□□□ -0.33
COPS3-218ENST00000584216 FAM83HQ6ZRV2 1179 aaPredicted RBP12.99□□□□□ -0.33
COPS3-218ENST00000584216 GPR135Q8IZ08 494 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 PQLC3Q8N755 202 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 TADA1Q96BN2 335 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 BARD1Q99728 777 aaKnown RBP12.99□□□□□ -0.33
COPS3-218ENST00000584216 NAT10Q9H0A0 1025 aaKnown RBP12.99□□□□□ -0.33
COPS3-218ENST00000584216 WWP1Q9H0M0 922 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 IL26Q9NPH9 171 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 HACD3Q9P035 362 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 GPN3Q9UHW5 284 aaPredicted RBP12.99□□□□□ -0.33
COPS3-218ENST00000584216 PKP3Q9Y446 797 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 HEY1Q9Y5J3 304 aa12.99□□□□□ -0.33
COPS3-218ENST00000584216 TEP1Q99973 2627 aaKnown RBP12.99□□□□□ -0.33
COPS3-218ENST00000584216 CELSR2Q9HCU4 2923 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 A0A0A6YYK5 440 aaPredicted RBP12.98□□□□□ -0.33
COPS3-218ENST00000584216 GLYATL1P3A0A0U1RQE8 302 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 GSAPA4D1B5 854 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 MGAT4DA6NG13 374 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 ZNF487B1APH4 448 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 POLR2CP19387 275 aaPredicted RBP12.98□□□□□ -0.33
COPS3-218ENST00000584216 FOLR3P41439 243 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 CTSCP53634 463 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 PTCHD3Q3KNS1 767 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 ATP13A4Q4VNC1 1196 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 FNBP1LQ5T0N5 605 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 FAM69BQ5VUD6 431 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 HGSNATQ68CP4 663 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 Q6ZS92 163 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 ACVR1CQ8NER5 493 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 OR2L2Q8NH16 312 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 OR1L3Q8NH93 324 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 N4BP2L2Q92802 583 aaPredicted RBP12.98□□□□□ -0.33
COPS3-218ENST00000584216 RNF157Q96PX1 679 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 RANBP9Q96S59 729 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 INSM2Q96T92 566 aaPredicted RBP12.98□□□□□ -0.33
COPS3-218ENST00000584216 CCM2Q9BSQ5 444 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
COPS3-218ENST00000584216 HSD3B7Q9H2F3 369 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 SRMSQ9H3Y6 488 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 SMOXQ9NWM0 555 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 CENPEQ02224 2701 aa12.98□□□□□ -0.33
COPS3-218ENST00000584216 CACNA1DQ01668 2161 aa12.97□□□□□ -0.33
COPS3-218ENST00000584216 ARHGAP10A1A4S6 786 aa12.97□□□□□ -0.33
COPS3-218ENST00000584216 AURKAO14965 403 aa12.97□□□□□ -0.33
COPS3-218ENST00000584216 LRRTM2O43300 516 aa12.97□□□□□ -0.33
COPS3-218ENST00000584216 LDB2O43679 373 aa12.97□□□□□ -0.33
COPS3-218ENST00000584216 PMPCBO75439 489 aa12.97□□□□□ -0.33
COPS3-218ENST00000584216 PROSCO94903 275 aa12.97□□□□□ -0.33
COPS3-218ENST00000584216 LCA5LO95447 670 aa12.97□□□□□ -0.33
COPS3-218ENST00000584216 ZFXP17010 805 aaPredicted RBP12.97□□□□□ -0.33
COPS3-218ENST00000584216 ARCN1P48444 511 aaKnown RBP12.97□□□□□ -0.33
COPS3-218ENST00000584216 ZNF789Q5FWF6 425 aa12.97□□□□□ -0.33
COPS3-218ENST00000584216 CRB2Q5IJ48 1285 aa12.97□□□□□ -0.33
COPS3-218ENST00000584216 GPRC6AQ5T6X5 926 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms