RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZRSR2Q15696 482 aaKnown RBP10.92□□□□□ -0.66
CCDC47-206ENST00000584112 PLA2G4EQ3MJ16 856 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 ZRANB3Q5FWF4 1079 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 SNAP47Q5SQN1 464 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 LDLRAP1Q5SW96 308 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 AGAP9Q5VTM2 703 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 CEACAM20Q6UY09 585 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 Q71RC1 249 aaPredicted RBP10.92□□□□□ -0.66
CCDC47-206ENST00000584112 TRAPPC5Q8IUR0 188 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 CDKL3Q8IVW4 592 aaPredicted RBP10.92□□□□□ -0.66
CCDC47-206ENST00000584112 RBM12BQ8IXT5 1001 aaKnown RBP10.92□□□□□ -0.66
CCDC47-206ENST00000584112 CACNA2D3Q8IZS8 1091 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 TTC30BQ8N4P2 665 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 BLOC1S5Q8TDH9 187 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 OXNAD1Q96HP4 312 aaPredicted RBP10.92□□□□□ -0.66
CCDC47-206ENST00000584112 PPP1R2P1Q96PQ5 205 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 ZPBPQ9BS86 351 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 TRIM8Q9BZR9 551 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 GBA3Q9H227 469 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 POT1Q9NUX5 634 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 OCIAD1Q9NX40 245 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 IL17CQ9P0M4 197 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 TLK1Q9UKI8 766 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 TFR2Q9UP52 801 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 DNAJC16Q9Y2G8 782 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 B3GALT1Q9Y5Z6 326 aa10.92□□□□□ -0.66
CCDC47-206ENST00000584112 SPTBP11277 2137 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 ABCA4P78363 2273 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 GLYATL1P3A0A0U1RQE8 302 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 SOWAHDA6NJG2 315 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 A8MU76 341 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 F5H423 210 aaPredicted RBP10.91□□□□□ -0.66
CCDC47-206ENST00000584112 ZG16O60844 167 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 MTX2O75431 263 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 CBX6O95503 412 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 ANKRD34CP0C6C1 535 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 RBL1P28749 1068 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 PTGER4P35408 488 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 UGT1A3P35503 534 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 HALP42357 657 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 CHRNA4P43681 627 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 RWDD2BP57060 319 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 MC2RQ01718 297 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 OTUD4Q01804 1114 aaKnown RBP10.91□□□□□ -0.66
CCDC47-206ENST00000584112 PRPSAP1Q14558 356 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 SEPT7Q16181 437 aaKnown RBP10.91□□□□□ -0.66
CCDC47-206ENST00000584112 KHDC1Q4VXA5 237 aaKnown RBP10.91□□□□□ -0.66
CCDC47-206ENST00000584112 ABRAXAS1Q6UWZ7 409 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 FAM151BQ6UXP7 276 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 WASH2PQ6VEQ5 465 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 TMEM26Q6ZUK4 368 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 ZNF547Q8IVP9 402 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 UNC5BQ8IZJ1 945 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 ZNF295-AS1Q8N0V1 137 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 TXLNBQ8N3L3 684 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 BMPERQ8N8U9 685 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 ACTL9Q8TC94 416 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 LRRC45Q96CN5 670 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 RANBP9Q96S59 729 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 TBC1D10AQ9BXI6 508 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 OSBPL8Q9BZF1 889 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 IL26Q9NPH9 171 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 WASH6PQ9NQA3 447 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 FBXO8Q9NRD0 319 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 SCHIP1Q9P0W5 487 aaPredicted RBP10.91□□□□□ -0.66
CCDC47-206ENST00000584112 SLC23A2Q9UGH3 650 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 TMPRSS11EQ9UL52 423 aa10.91□□□□□ -0.66
CCDC47-206ENST00000584112 AAR2Q9Y312 384 aaKnown RBP10.91□□□□□ -0.66
CCDC47-206ENST00000584112 SEC16AO15027 2179 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 SNRNP200O75643 2136 aaKnown RBP10.9□□□□□ -0.66
CCDC47-206ENST00000584112 C2orf81A6NN90 581 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 STX7O15400 261 aaKnown RBP10.9□□□□□ -0.66
CCDC47-206ENST00000584112 TOX3O15405 576 aaPredicted RBP10.9□□□□□ -0.66
CCDC47-206ENST00000584112 PJA2O43164 708 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 UBXN7O94888 489 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 TJP3O95049 919 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 RBP3P10745 1247 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 AMD1P17707 334 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 RPL10P27635 214 aaKnown RBP10.9□□□□□ -0.66
CCDC47-206ENST00000584112 SLC19A1P41440 591 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 VAV2P52735 878 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 EIF3EP60228 445 aaKnown RBP10.9□□□□□ -0.66
CCDC47-206ENST00000584112 PDE1BQ01064 536 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 PDAP1Q13442 181 aaKnown RBP10.9□□□□□ -0.66
CCDC47-206ENST00000584112 CHRNA6Q15825 494 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 ANKS6Q68DC2 871 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 DARS2Q6PI48 645 aaKnown RBP10.9□□□□□ -0.66
CCDC47-206ENST00000584112 C11orf96Q7Z7L8 435 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 KIAA1328Q86T90 577 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 AMZ2Q86W34 360 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 DDHD1Q8NEL9 900 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 CXorf40BQ96DE9 158 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 ZNF514Q96K75 400 aaPredicted RBP10.9□□□□□ -0.66
CCDC47-206ENST00000584112 FICDQ9BVA6 458 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 SMOXQ9NWM0 555 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 ZNF624Q9P2J8 865 aaPredicted RBP10.9□□□□□ -0.66
CCDC47-206ENST00000584112 KLHL3Q9UH77 587 aa10.9□□□□□ -0.66
CCDC47-206ENST00000584112 DNMT3AQ9Y6K1 912 aaPredicted RBP10.9□□□□□ -0.66
CCDC47-206ENST00000584112 MXRA5Q9NR99 2828 aa10.89□□□□□ -0.67
CCDC47-206ENST00000584112 KLHL33A6NCF5 533 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms