RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 NLNQ9BYT8 704 aa17.46■□□□□ 0.39
MKS1-209ENST00000580127 TRIM55Q9BYV6 548 aa17.46■□□□□ 0.39
MKS1-209ENST00000580127 SLC29A3Q9BZD2 475 aa17.46■□□□□ 0.39
MKS1-209ENST00000580127 WWP1Q9H0M0 922 aa17.46■□□□□ 0.39
MKS1-209ENST00000580127 KIR3DX1Q9H7L2 352 aa17.46■□□□□ 0.39
MKS1-209ENST00000580127 SLAMF7Q9NQ25 335 aa17.46■□□□□ 0.39
MKS1-209ENST00000580127 CUEDC1Q9NWM3 386 aaPredicted RBP17.46■□□□□ 0.39
MKS1-209ENST00000580127 SLC24A2Q9UI40 661 aa17.46■□□□□ 0.39
MKS1-209ENST00000580127 BSNQ9UPA5 3926 aa17.46■□□□□ 0.39
MKS1-209ENST00000580127 MEN1O00255 615 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 CBFA2T2O43439 604 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 KLHL41O60662 606 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 ANXA9O76027 345 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 HBQ1P09105 142 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 NFKB1P19838 968 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 CDH3P22223 829 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 GNLYP22749 145 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 CTSCP53634 463 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 GPR19Q15760 415 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 PAPD7Q5XG87 772 aaKnown RBP17.45■□□□□ 0.38
MKS1-209ENST00000580127 KDELC1Q6UW63 502 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 FAM83HQ6ZRV2 1179 aaPredicted RBP17.45■□□□□ 0.38
MKS1-209ENST00000580127 MED25Q71SY5 747 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 B4GALNT4Q76KP1 1039 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 TMEM102Q8N9M5 508 aaPredicted RBP17.45■□□□□ 0.38
MKS1-209ENST00000580127 IPMKQ8NFU5 416 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 GPR150Q8NGU9 434 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 SSC4DQ8WTU2 575 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 HEXDCQ8WVB3 486 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 LRRC45Q96CN5 670 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 ZNF501Q96CX3 271 aaPredicted RBP17.45■□□□□ 0.38
MKS1-209ENST00000580127 INSM2Q96T92 566 aaPredicted RBP17.45■□□□□ 0.38
MKS1-209ENST00000580127 DNAJC7Q99615 494 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 DPH2Q9BQC3 489 aaPredicted RBP17.45■□□□□ 0.38
MKS1-209ENST00000580127 AKIRIN1Q9H9L7 192 aaPredicted RBP17.45■□□□□ 0.38
MKS1-209ENST00000580127 MLXIPLQ9NP71 852 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 C1GALT1Q9NS00 363 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 SMOXQ9NWM0 555 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 PLEKHB1Q9UF11 243 aaPredicted RBP17.45■□□□□ 0.38
MKS1-209ENST00000580127 BTRCQ9Y297 605 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 MAP4K5Q9Y4K4 846 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 CFAP20Q9Y6A4 193 aaKnown RBP17.45■□□□□ 0.38
MKS1-209ENST00000580127 USP9XQ93008 2570 aaPredicted RBP17.45■□□□□ 0.38
MKS1-209ENST00000580127 ICE1Q9Y2F5 2266 aa17.45■□□□□ 0.38
MKS1-209ENST00000580127 SYCE3A1L190 88 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 C5orf60A6NFR6 353 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 HACD1B0YJ81 288 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 CFAP99D6REC4 459 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 PDGFAP04085 211 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 CD68P34810 354 aaPredicted RBP17.44■□□□□ 0.38
MKS1-209ENST00000580127 CDKN2BP42772 138 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 RPS18P62269 152 aaKnown RBP17.44■□□□□ 0.38
MKS1-209ENST00000580127 WASHC5Q12768 1159 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 ASTE1Q2TB18 679 aaPredicted RBP17.44■□□□□ 0.38
MKS1-209ENST00000580127 TFDP3Q5H9I0 405 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 KAZNQ674X7 775 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 MFSD7Q6UXD7 560 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 ZNF517Q6ZMY9 492 aaPredicted RBP17.44■□□□□ 0.38
MKS1-209ENST00000580127 ZC3H18Q86VM9 953 aaKnown RBP17.44■□□□□ 0.38
MKS1-209ENST00000580127 LURAP1LQ8IV03 231 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 CFAP206Q8IYR0 622 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 RCOR2Q8IZ40 523 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 OR4E2Q8NGC2 313 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 LCN9Q8WX39 176 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 MRGPRX2Q96LB1 330 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 CHST8Q9H2A9 424 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 SRMSQ9H3Y6 488 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 ASB8Q9H765 288 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 MAP10Q9P2G4 905 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 SAE1Q9UBE0 346 aaPredicted RBP17.44■□□□□ 0.38
MKS1-209ENST00000580127 RSPH14Q9UHP6 348 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 INTUQ9ULD6 942 aa17.44■□□□□ 0.38
MKS1-209ENST00000580127 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.44■□□□□ 0.38
MKS1-209ENST00000580127 SEC16AO15027 2179 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 TNRC6AQ8NDV7 1962 aaKnown RBP17.43■□□□□ 0.38
MKS1-209ENST00000580127 TMEM63AO94886 807 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 ZRANB2O95218 330 aaKnown RBP eCLIP17.43■□□□□ 0.38
MKS1-209ENST00000580127 PRAMEF1O95521 474 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 DDAH2O95865 285 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 POLBP06746 335 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 CD63P08962 238 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 CYP2A7P20853 494 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 AGXTP21549 392 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 PREPP48147 710 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 GEMP55040 296 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 GPS2Q13227 327 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 TAF1AQ15573 450 aaPredicted RBP17.43■□□□□ 0.38
MKS1-209ENST00000580127 NADK2Q4G0N4 442 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 DET1Q7L5Y6 550 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 HOOK3Q86VS8 718 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 DSELQ8IZU8 1212 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 ACVR1CQ8NER5 493 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 ULK4Q96C45 1275 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 IP6K3Q96PC2 410 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 C17orf62Q9BQA9 187 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 VPS37BQ9H9H4 285 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 TCFL5Q9UL49 500 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 PADI2Q9Y2J8 665 aa17.43■□□□□ 0.38
MKS1-209ENST00000580127 MED13Q9UHV7 2174 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 SLC9B1P1A6NJY1 282 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms