RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 ELK3P41970 407 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 MRPS25P82663 173 aaKnown RBP13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 ILF2Q12905 390 aaKnown RBP13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 PDIA2Q13087 525 aaKnown RBP13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 RPE65Q16518 533 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 ISXQ2M1V0 245 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 STEAP4Q687X5 459 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 PTRHD1Q6GMV3 140 aaKnown RBP13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 KIAA0408Q6ZU52 694 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 CEP128Q6ZU80 1094 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 LDB1Q86U70 411 aaPredicted RBP13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 PIM3Q86V86 326 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 Q8N9G6 341 aaPredicted RBP13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 ASZ1Q8WWH4 475 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 ELMO1Q92556 727 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 LPGAT1Q92604 370 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 TMEM159Q96B96 161 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 LRRC1Q9BTT6 524 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 WWP1Q9H0M0 922 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 SLC40A1Q9NP59 571 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 LATS2Q9NRM7 1088 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 FAM114A2Q9NRY5 505 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 KCNK4Q9NYG8 393 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 GRHL1Q9NZI5 618 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 KLK13Q9UKR3 277 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 FBXO5Q9UKT4 447 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 WDR37Q9Y2I8 494 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 COMMD10Q9Y6G5 202 aa13.6□□□□□ -0.23
SNORD3B-1-201ENST00000577988 IGHV1OR21-1A0A087WYE8 117 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 UBA6A0AVT1 1052 aaPredicted RBP13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 SLC5A10A0PJK1 596 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 DUX1O43812 170 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 GSTA2P09210 222 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 MTHFD1P11586 935 aaKnown RBP13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 CD1CP29017 333 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 PLTPP55058 493 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 OR1D5P58170 312 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 TARDBPQ13148 414 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 TMED2Q15363 201 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 SEPT7Q16181 437 aaKnown RBP13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 ZNF470Q6ECI4 717 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 GALNT7Q86SF2 657 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 KCNMB4Q86W47 210 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 AHCYL2Q96HN2 611 aaKnown RBP13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 C12orf66Q96MD2 445 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 INSM2Q96T92 566 aaPredicted RBP13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 TRIM56Q9BRZ2 755 aaKnown RBP13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 NRSN2Q9GZP1 204 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 TSPYL1Q9H0U9 437 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 OR52A5Q9H2C5 316 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 MVB12BQ9H7P6 319 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 KLHL42Q9P2K6 505 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 PSMD13Q9UNM6 376 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 CHMP2BQ9UQN3 213 aa13.59□□□□□ -0.23
SNORD3B-1-201ENST00000577988 OR52A4PA6NMU1 304 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 D6RAR5 112 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 GOLGA8KD6RF30 607 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 GOLGA8TH3BQL2 631 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 CSO75390 466 aaKnown RBP13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 GPC4O75487 556 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 SLCO2B1O94956 709 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 TOP3BO95985 862 aaKnown RBP13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 PKMP14618 531 aaKnown RBP13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 CCKBRP32239 447 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 LEPRP48357 1165 aaKnown RBP13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 EIF3BP55884 814 aaKnown RBP13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 ZFP36L1Q07352 338 aaKnown RBP13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 EIF3IQ13347 325 aaKnown RBP13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 TRA2AQ13595 282 aaKnown RBP eCLIP13.58□□□□□ -0.242e-21■■■■■ 72.8
SNORD3B-1-201ENST00000577988 HSP90AA5PQ58FG0 334 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 TMEM71Q6P5X7 295 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 KLHL35Q6PF15 583 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 WDR74Q6RFH5 385 aaPredicted RBP13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 XKR5Q6UX68 686 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 UNC5AQ6ZN44 842 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 CYS1Q717R9 158 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 IGDCC3Q8IVU1 814 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 CNTN4Q8IWV2 1026 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 PYROXD1Q8WU10 500 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 NAT14Q8WUY8 206 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 CERS2Q96G23 380 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 RMDN2Q96LZ7 410 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 PWWP2AQ96N64 755 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 BIRC8Q96P09 236 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 STRADBQ9C0K7 418 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 CCDC68Q9H2F9 335 aa13.58□□□□□ -0.24
SNORD3B-1-201ENST00000577988 BHMG1C9JSJ3 638 aaPredicted RBP13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 ZNF500O60304 480 aaPredicted RBP13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 BANF1O75531 89 aa13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 AOAHP28039 575 aa13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 FMO4P31512 558 aa13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 CCR7P32248 378 aa13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 INHBCP55103 352 aa13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 SLC7A5Q01650 507 aa13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 CTBP1Q13363 440 aa13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 CAMK2BQ13554 666 aa13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 KRT33BQ14525 404 aa13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 RTP5Q14D33 572 aa13.57□□□□□ -0.24
SNORD3B-1-201ENST00000577988 AMZ1Q400G9 498 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms