RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 HLA-DPA1P20036 260 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 CDH3P22223 829 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 OTX2P32243 289 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 HMGCLP35914 325 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 PRKCIP41743 596 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 TNNT3P45378 269 aaPredicted RBP8.76□□□□□ -1.01
SMG6-218ENST00000575454 KLHL30Q0D2K2 578 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 MMRN1Q13201 1228 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 DPYSL3Q14195 570 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 KRT33BQ14525 404 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 SLC14A2Q15849 920 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 ATP13A5Q4VNC0 1218 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 KHDC1Q4VXA5 237 aaKnown RBP8.76□□□□□ -1.01
SMG6-218ENST00000575454 DCAF10Q5QP82 559 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 METRNLQ641Q3 311 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 TXNRD3NBQ6F5E7 133 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 LCN10Q6JVE6 187 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 MCEMP1Q8IX19 187 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 GPR150Q8NGU9 434 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 IMP4Q96G21 291 aaKnown RBP8.76□□□□□ -1.01
SMG6-218ENST00000575454 RANBP9Q96S59 729 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 TLR10Q9BXR5 811 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 SLC25A51Q9H1U9 297 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 KIR3DX1Q9H7L2 352 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 GPN3Q9UHW5 284 aaPredicted RBP8.76□□□□□ -1.01
SMG6-218ENST00000575454 SLC24A2Q9UI40 661 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 ANAPC7Q9UJX3 599 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 PSMD13Q9UNM6 376 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 AP1M2Q9Y6Q5 423 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 NIPBLQ6KC79 2804 aaeCLIP8.76□□□□□ -1.01
SMG6-218ENST00000575454 TMEM150CB9EJG8 249 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 KCNK1O00180 336 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 NDST3O95803 873 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 CD48P09326 243 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 SLC35G4P0C7Q5 338 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 PIRTP0C851 137 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 EDN3P14138 238 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 FOLR3P41439 243 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 ARCN1P48444 511 aaKnown RBP8.75□□□□□ -1.01
SMG6-218ENST00000575454 ARSEP51690 589 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 KPNA2P52292 529 aaKnown RBP8.75□□□□□ -1.01
SMG6-218ENST00000575454 GBE1Q04446 702 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 PPIDQ08752 370 aaKnown RBP8.75□□□□□ -1.01
SMG6-218ENST00000575454 ABRQ12979 859 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 ITGA9Q13797 1035 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 PPP2R5EQ16537 467 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 IRAK1BP1Q5VVH5 260 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 HGSNATQ68CP4 663 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 FCRL6Q6DN72 434 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 TMEM220Q6QAJ8 160 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 GPR135Q8IZ08 494 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 CNTD1Q8N815 330 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 DDHD1Q8NEL9 900 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 OR1L3Q8NH93 324 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 N4BP2L2Q92802 583 aaPredicted RBP8.75□□□□□ -1.01
SMG6-218ENST00000575454 C12orf66Q96MD2 445 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 WDR77Q9BQA1 342 aaPredicted RBP8.75□□□□□ -1.01
SMG6-218ENST00000575454 UNKQ9C0B0 810 aaKnown RBP8.75□□□□□ -1.01
SMG6-218ENST00000575454 ZNF552Q9H707 407 aaPredicted RBP8.75□□□□□ -1.01
SMG6-218ENST00000575454 IL26Q9NPH9 171 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 ATP13A2Q9NQ11 1180 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 ANO10Q9NW15 660 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 LCMT1Q9UIC8 334 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 POMT2Q9UKY4 750 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 TMPRSS11EQ9UL52 423 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 OSGIN2Q9Y236 505 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 BZW2Q9Y6E2 419 aaKnown RBP8.75□□□□□ -1.01
SMG6-218ENST00000575454 ARHGEF17Q96PE2 2063 aaPredicted RBP8.75□□□□□ -1.01
SMG6-218ENST00000575454 CSMD2Q7Z408 3487 aa8.75□□□□□ -1.01
SMG6-218ENST00000575454 CCDC168Q8NDH2 2452 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 ESPL1Q14674 2120 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 GLYATL1P3A0A0U1RQE8 302 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 GSAPA4D1B5 854 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 MGAT4DA6NG13 374 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 PRSS44E7EML9 344 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 ZNF749O43361 778 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 LDB2O43679 373 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 KLF7O75840 302 aaPredicted RBP8.74□□□□□ -1.01
SMG6-218ENST00000575454 CYP1A2P05177 515 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 PRF1P14222 555 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 POLR2CP19387 275 aaPredicted RBP8.74□□□□□ -1.01
SMG6-218ENST00000575454 MSH3P20585 1137 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 GRNP28799 593 aaKnown RBP8.74□□□□□ -1.01
SMG6-218ENST00000575454 PTGER4P35408 488 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 SPAM1P38567 509 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 TSFMP43897 325 aaKnown RBP8.74□□□□□ -1.01
SMG6-218ENST00000575454 ZBTB17Q13105 803 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 AIMP2Q13155 320 aaKnown RBP8.74□□□□□ -1.01
SMG6-218ENST00000575454 ART3Q13508 389 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 NFE2L1Q14494 772 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 GSE1Q14687 1217 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 PDK1Q15118 436 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 LLGL1Q15334 1064 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 CYP2A13Q16696 494 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 ZXDCQ2QGD7 858 aaPredicted RBP8.74□□□□□ -1.01
SMG6-218ENST00000575454 PTCHD3Q3KNS1 767 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 ZNF789Q5FWF6 425 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 PRAMEF17Q5VTA0 474 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 FAM69BQ5VUD6 431 aa8.74□□□□□ -1.01
SMG6-218ENST00000575454 MLIPQ5VWP3 458 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms