RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 DNMT3AQ9Y6K1 912 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 F8P00451 2351 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 APCP25054 2843 aa11.49□□□□□ -0.57
GTF3C1-209ENST00000568569 SEC16AO15027 2179 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 DIDO1Q9BTC0 2240 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 ARHGAP10A1A4S6 786 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 SLC9B1P1A6NJY1 282 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 TMEM150CB9EJG8 249 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 MATN2O00339 956 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 AURKAO14965 403 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 LCA5LO95447 670 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 NDST3O95803 873 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 IGHEP01854 428 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 PRF1P14222 555 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 AGXTP21549 392 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 CDH3P22223 829 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 PBLDP30039 288 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 HMGCLP35914 325 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 HADHAP40939 763 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 PREPP48147 710 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 ARCN1P48444 511 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 ATP13A4Q4VNC1 1196 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 CRB2Q5IJ48 1285 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 DCAF10Q5QP82 559 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 METRNLQ641Q3 311 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 FBXO38Q6PIJ6 1188 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 RBM43Q6ZSC3 357 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 GALNT16Q8N428 558 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 ZADH2Q8N4Q0 377 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 RASGEF1AQ8N9B8 481 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 DDHD1Q8NEL9 900 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 OR1L3Q8NH93 324 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 DTX3LQ8TDB6 740 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 INPP5DQ92835 1189 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 TADA1Q96BN2 335 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 C12orf66Q96MD2 445 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 PPM1MQ96MI6 270 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 AGAP3Q96P47 875 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 C17orf62Q9BQA9 187 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 CEP41Q9BYV8 373 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 SLC25A51Q9H1U9 297 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 HSD3B7Q9H2F3 369 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 IL26Q9NPH9 171 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 C1GALT1Q9NS00 363 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 SLC24A2Q9UI40 661 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 POMT2Q9UKY4 750 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 SPO11Q9Y5K1 396 aa11.48□□□□□ -0.57
GTF3C1-209ENST00000568569 CELSR1Q9NYQ6 3014 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 OR2AG2A6NM03 316 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 E7EQ34 232 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 PEX12O00623 359 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 DDX3YO15523 660 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 MAP3K7O43318 606 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 KLF7O75840 302 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 CYP1A2P05177 515 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 HBQ1P09105 142 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 SKILP12757 684 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 POLR2CP19387 275 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 HLA-DPA1P20036 260 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 NDUFS1P28331 727 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 HNRNPH3P31942 346 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 SPAM1P38567 509 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 GLRBP48167 497 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 SSPNQ14714 243 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 ZRSR2Q15696 482 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 PPP2R5EQ16537 467 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 STX1AQ16623 288 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 LONRF2Q1L5Z9 754 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 HGSNATQ68CP4 663 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 DUS1LQ6P1R4 473 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 TMEM220Q6QAJ8 160 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 Q6ZS92 163 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 CUZD1Q86UP6 607 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 INSM2Q96T92 566 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 WWP1Q9H0M0 922 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 TRABDQ9H4I3 376 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 ZNF552Q9H707 407 aaPredicted RBP11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 RTN4Q9NQC3 1192 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 SERTAD3Q9UJW9 196 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 ACSL5Q9ULC5 683 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 NTNG1Q9Y2I2 539 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 COLEC10Q9Y6Z7 277 aa11.47□□□□□ -0.57
GTF3C1-209ENST00000568569 ZFHX3Q15911 3703 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 KLHL33A6NCF5 533 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 MGAT4DA6NG13 374 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 GPR39O43194 453 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 LRRTM2O43300 516 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 LDB2O43679 373 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 SLC35G4P0C7Q5 338 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 CA5AP35218 305 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 AP1B1Q10567 949 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 ITGA9Q13797 1035 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 KRT33BQ14525 404 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 LLGL1Q15334 1064 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 GPRC6AQ5T6X5 926 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 ZNF385CQ66K41 422 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 SASS6Q6UVJ0 657 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 FAM151BQ6UXP7 276 aa11.46□□□□□ -0.57
GTF3C1-209ENST00000568569 SPOCD1Q6ZMY3 1216 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms