RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 CAMK2BQ13554 666 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 GPRIN1Q7Z2K8 1008 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 ATG16L2Q8NAA4 619 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 MINDY2Q8NBR6 621 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 SUN5Q8TC36 379 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 ZNF641Q96N77 438 aaPredicted RBP19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 NUAK2Q9H093 628 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 RNF167Q9H6Y7 350 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 EXOSC4Q9NPD3 245 aaKnown RBP19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 NMRK2Q9NPI5 230 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 CD4P01730 458 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 HLA-DQB2P05538 268 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 CCDC159P0C7I6 412 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 CHRNB1P11230 501 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 CLCN5P51795 746 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 CLCNKBP51801 687 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 PRKG2Q13237 762 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 CLCA4Q14CN2 919 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 TSNQ15631 228 aaKnown RBP19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 ANKS6Q68DC2 871 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 IL27RAQ6UWB1 636 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 PROSER1Q86XN7 944 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 LYSMD2Q8IV50 215 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 SCAMP5Q8TAC9 235 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 AURKBQ96GD4 344 aaPredicted RBP19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 KCNS3Q9BQ31 491 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 UGT2B28Q9BY64 529 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 SDR39U1Q9NRG7 319 aaPredicted RBP19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 PAQR5Q9NXK6 330 aaPredicted RBP19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 CD274Q9NZQ7 290 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 HACD3Q9P035 362 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 CARD8Q9Y2G2 431 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 NUP214P35658 2090 aaPredicted RBP19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 KIAA0100Q14667 2235 aaKnown RBP19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 ZSCAN5BA6NJL1 495 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 BTN3A1O00481 513 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 OR2B6P58173 313 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 CBLBQ13191 982 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 CCDC58Q4VC31 144 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 C9orf57Q5W0N0 161 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 NOTUMQ6P988 496 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 PLEKHH3Q7Z736 793 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 GALNT10Q86SR1 603 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 TMEM209Q96SK2 561 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 TRMOQ9BU70 441 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 C11orf84Q9BUA3 381 aaPredicted RBP19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 PLSCR3Q9NRY6 295 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 ERVK13-1Q9NX77 482 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 MAGEL2Q9UJ55 1249 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 TPRKBQ9Y3C4 175 aa19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 POLR3HQ9Y535 204 aaPredicted RBP19.54■□□□□ 0.72
AC009041.2-204ENST00000568394 TRIP12Q14669 1992 aaPredicted RBP19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 IGKV6-21A0A0C4DH24 114 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 AIREO43918 545 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 OR4F21O95013 312 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 NPR3P17342 541 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 PFKLP17858 780 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 ZNF484Q5JVG2 852 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 OTUD1Q5VV17 481 aaPredicted RBP19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 SLC27A1Q6PCB7 646 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 CHCHD6Q9BRQ6 235 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 AP5M1Q9H0R1 490 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 CARS2Q9HA77 564 aaKnown RBP19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 SNX6Q9UNH7 406 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 DNAJC25-GNG10A0A024R161 153 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 UPK1BO75841 260 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 C7P10643 843 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 IGFBP5P24593 272 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 CDK5R2Q13319 367 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 MFSD10Q14728 455 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 PAF1Q8N7H5 531 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 UBASH3BQ8TF42 649 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 RBM4BQ9BQ04 359 aaKnown RBP19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 RBM4Q9BWF3 364 aaKnown RBP19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 EHD3Q9NZN3 535 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 INTS6Q9UL03 887 aaKnown RBP19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 KRT87PA6NCN2 255 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 FFAR3O14843 346 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 GPR42O15529 346 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 ELNP15502 786 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 THPOP40225 353 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 DEFA1P59665 94 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 DEFA3P59666 94 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 C8orf82Q6P1X6 216 aaPredicted RBP19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 P3H2Q8IVL5 708 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 RHOXF1Q8NHV9 184 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 TNKS2Q9H2K2 1166 aa19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 KAT8Q9H7Z6 458 aaKnown RBP19.53■□□□□ 0.72
AC009041.2-204ENST00000568394 AP3D1O14617 1153 aa19.52■□□□□ 0.72
AC009041.2-204ENST00000568394 SLC2A4P14672 509 aa19.52■□□□□ 0.72
AC009041.2-204ENST00000568394 CRY1Q16526 586 aa19.52■□□□□ 0.72
AC009041.2-204ENST00000568394 SMU1Q2TAY7 513 aa19.52■□□□□ 0.72
AC009041.2-204ENST00000568394 TPRG1LQ5T0D9 272 aa19.52■□□□□ 0.72
AC009041.2-204ENST00000568394 FKBP9P1Q75LS8 142 aa19.52■□□□□ 0.72
AC009041.2-204ENST00000568394 HID1Q8IV36 788 aa19.52■□□□□ 0.72
AC009041.2-204ENST00000568394 GALNT12Q8IXK2 581 aa19.52■□□□□ 0.72
AC009041.2-204ENST00000568394 TMEM199Q8N511 208 aa19.52■□□□□ 0.72
AC009041.2-204ENST00000568394 ASCC1Q8N9N2 400 aaKnown RBP19.52■□□□□ 0.72
AC009041.2-204ENST00000568394 CDC26Q8NHZ8 85 aa19.52■□□□□ 0.72
AC009041.2-204ENST00000568394 ZNF560Q96MR9 790 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms