RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CROTQ9UKG9 612 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 AMFRQ9UKV5 643 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 ACSL5Q9ULC5 683 aa17.89■□□□□ 0.45
USB1-213ENST00000566292 PACSIN2Q9UNF0 486 aaPredicted RBP17.89■□□□□ 0.45
USB1-213ENST00000566292 UBR5O95071 2799 aaPredicted RBP17.88■□□□□ 0.45
USB1-213ENST00000566292 KLHL33A6NCF5 533 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 OR5K3A6NET4 321 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 TCN2P20062 427 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 DLSTP36957 453 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 PRLHRP49683 370 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 PDE1BQ01064 536 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 MC1RQ01726 317 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 DEFB109BQ30KR1 87 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 CRTC2Q53ET0 693 aaPredicted RBP17.88■□□□□ 0.45
USB1-213ENST00000566292 ATG14Q6ZNE5 492 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 KIAA1328Q86T90 577 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 PPP1R3BQ86XI6 285 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 SIDT2Q8NBJ9 832 aaKnown RBP17.88■□□□□ 0.45
USB1-213ENST00000566292 ULK4Q96C45 1275 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 STAMBPL1Q96FJ0 436 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 PPP1R2P1Q96PQ5 205 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 C19orf43Q9BQ61 176 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 HRASLS2Q9NWW9 162 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 SLC24A2Q9UI40 661 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 LNPEPQ9UIQ6 1025 aa17.88■□□□□ 0.45
USB1-213ENST00000566292 SPTBP11277 2137 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 TLCD2A6NGC4 264 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 DDX3YO15523 660 aaKnown RBP17.87■□□□□ 0.45
USB1-213ENST00000566292 METTL18O95568 372 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 POLBP06746 335 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 EBLN1P0CF75 366 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 ITGALP20701 1170 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 HADHAP40939 763 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 CDKN1CP49918 316 aaPredicted RBP17.87■□□□□ 0.45
USB1-213ENST00000566292 KCNC4Q03721 635 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 KLF1Q13351 362 aaPredicted RBP17.87■□□□□ 0.45
USB1-213ENST00000566292 TUBB3Q13509 450 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 DNTTIP2Q5QJE6 756 aaKnown RBP17.87■□□□□ 0.45
USB1-213ENST00000566292 CAPRIN2Q6IMN6 1127 aaKnown RBP17.87■□□□□ 0.45
USB1-213ENST00000566292 PEX26Q7Z412 305 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 SNX20Q7Z614 316 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 GAS2L3Q86XJ1 694 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 PTRH1Q86Y79 214 aaKnown RBP17.87■□□□□ 0.45
USB1-213ENST00000566292 FAM71DQ8N9W8 422 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 HM13Q8TCT9 377 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 DCUN1D1Q96GG9 259 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 DNAJC1Q96KC8 554 aaKnown RBP17.87■□□□□ 0.45
USB1-213ENST00000566292 CD180Q99467 661 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 BAG1Q99933 345 aaPredicted RBP17.87■□□□□ 0.45
USB1-213ENST00000566292 CLMPQ9H6B4 373 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 KIR3DX1Q9H7L2 352 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 PDE7BQ9NP56 450 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 FEZ2Q9UHY8 353 aaPredicted RBP17.87■□□□□ 0.45
USB1-213ENST00000566292 RARRES3Q9UL19 164 aa17.87■□□□□ 0.45
USB1-213ENST00000566292 R3HDM2Q9Y2K5 976 aaKnown RBP17.87■□□□□ 0.45
USB1-213ENST00000566292 FTCDO95954 541 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 FURINP09958 794 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 SLC35G4P0C7Q5 338 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 PRSS56P0CW18 603 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 RALBP11234 206 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 ATP1B2P14415 290 aaPredicted RBP17.86■□□□□ 0.45
USB1-213ENST00000566292 MC4RP32245 332 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 ARCN1P48444 511 aaKnown RBP17.86■□□□□ 0.45
USB1-213ENST00000566292 GDF10P55107 478 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 PARP6Q2NL67 630 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 ZNF658BQ4V348 819 aaPredicted RBP17.86■□□□□ 0.45
USB1-213ENST00000566292 PWWP2BQ6NUJ5 590 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 ARHGEF18Q6ZSZ5 1173 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 OOSP2Q86WS3 158 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 KMT5CQ86Y97 462 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 CFAP206Q8IYR0 622 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 TTC13Q8NBP0 860 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 ZFPM2Q8WW38 1151 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 PPM1MQ96MI6 270 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 COPS8Q99627 209 aa17.86■□□□□ 0.45
USB1-213ENST00000566292 IGLV3-16A0A075B6K0 115 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 TRBV5-4A0A0C4DH59 114 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 TCRBV7S2A1N4TA0A589 114 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 UBA6A0AVT1 1052 aaPredicted RBP17.85■□□□□ 0.45
USB1-213ENST00000566292 OR6C74A6NCV1 312 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 GOLGA6L9A6NEM1 432 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 H7C0S8 307 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 ZNF189O75820 626 aaPredicted RBP17.85■□□□□ 0.45
USB1-213ENST00000566292 TPH1P17752 444 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 CSRP3P50461 194 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 KPNA2P52292 529 aaKnown RBP17.85■□□□□ 0.45
USB1-213ENST00000566292 ACY1Q03154 408 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 CYB5D1Q6P9G0 228 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 FBXO38Q6PIJ6 1188 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 D2HGDHQ8N465 521 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 UBL4BQ8N7F7 174 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 SLC35B2Q8TB61 432 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 HEXDCQ8WVB3 486 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 APOBEC4Q8WW27 367 aaKnown RBP17.85■□□□□ 0.45
USB1-213ENST00000566292 DESI2Q9BSY9 194 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 AKIRIN1Q9H9L7 192 aaPredicted RBP17.85■□□□□ 0.45
USB1-213ENST00000566292 LHX9Q9NQ69 397 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 FGF21Q9NSA1 209 aa17.85■□□□□ 0.45
USB1-213ENST00000566292 NLE1Q9NVX2 485 aaPredicted RBP17.85■□□□□ 0.45
USB1-213ENST00000566292 ZDHHC3Q9NYG2 299 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms