RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 PLXNA1Q9UIW2 1896 aa2.3□□□□□ -2.04
SUB1P3-201ENST00000564581 SHROOM3Q8TF72 1996 aa2.3□□□□□ -2.04
SUB1P3-201ENST00000564581 NAV3Q8IVL0 2385 aa2.3□□□□□ -2.04
SUB1P3-201ENST00000564581 ITPR3Q14573 2671 aa2.3□□□□□ -2.04
SUB1P3-201ENST00000564581 WDFY4Q6ZS81 3184 aa2.3□□□□□ -2.04
SUB1P3-201ENST00000564581 C5orf42Q9H799 3197 aa2.3□□□□□ -2.04
SUB1P3-201ENST00000564581 DCHS1Q96JQ0 3298 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 C2CD3Q4AC94 2353 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 MYO7AQ13402 2215 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 ADGRB1O14514 1584 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 CDHR2Q9BYE9 1310 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 ZNF541Q9H0D2 1346 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 A0A087X002 238 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 ZCWPW2A0A1B0GU75 182 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 C5orf60A6NFR6 353 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 NCAM2O15394 837 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 SPINT2O43291 252 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 PRKNO60260 465 aaPredicted RBP2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 COX7A2P14406 83 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 PRMT2P55345 433 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 ITPK1Q13572 414 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 EFR3AQ14156 821 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 TMEM187Q14656 261 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 TECRLQ5HYJ1 363 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 C18orf63Q68DL7 685 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 SIGIRRQ6IA17 410 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 RBMS3Q6XE24 437 aaKnown RBP2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 LDHAL6AQ6ZMR3 332 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 LRRC8DQ7L1W4 858 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 SLC46A3Q7Z3Q1 461 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 NRROSQ86YC3 692 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 NKAPQ8N5F7 415 aaKnown RBP2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 TMEM190Q8WZ59 177 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 HERVK_113Q902F9 699 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 PIGBQ92521 554 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 APBB2Q92870 758 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 SCRN2Q96FV2 425 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 PSMD1Q99460 953 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 EGFL8Q99944 293 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 EIF2AK1Q9BQI3 630 aaKnown RBP2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 H2AFJQ9BTM1 129 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 IFIH1Q9BYX4 1025 aaKnown RBP2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 BICC1Q9H694 974 aaKnown RBP2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 HCN3Q9P1Z3 774 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 MARCH4Q9P2E8 410 aaPredicted RBP2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 GPR52Q9Y2T5 361 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 C2CD2Q9Y426 696 aa2.29□□□□□ -2.04
SUB1P3-201ENST00000564581 TJP1Q07157 1748 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 CD163L1Q9NR16 1453 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 OTOGLQ3ZCN5 2332 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 ROCK1Q13464 1354 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 FAM205AQ6ZU69 1335 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 USP42Q9H9J4 1324 aaKnown RBP2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 TRIOO75962 3097 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 DNAH12Q6ZR08 3092 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 GAGE10A6NGK3 116 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 DUXAA6NLW8 204 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 TNPO2O14787 897 aaKnown RBP2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 PIP5K1CO60331 668 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 SYNCRIPO60506 623 aaKnown RBP2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 GUCY1B2O75343 617 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 KCNK5O95279 499 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 IRF1P10914 325 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 IL7RP16871 459 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 ZNF26P17031 533 aaPredicted RBP2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 CNTFP26441 200 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 PSMC2P35998 433 aaKnown RBP2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 APOBEC1P41238 236 aaKnown RBP2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 IRX1P78414 480 aaPredicted RBP2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 PLIN5Q00G26 463 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 SPOCK1Q08629 439 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 GAGE5Q13069 117 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 GAGE6Q13070 117 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 FGFBP1Q14512 234 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 RRM2BQ7LG56 351 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 PIWIL4Q7Z3Z4 852 aaKnown RBP2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 GTSCR1Q86UQ5 136 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 GPR180Q86V85 440 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 SPATA5Q8NB90 893 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 ZNF653Q96CK0 615 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 KIF1BPQ96EK5 621 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 ART5Q96L15 291 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 ZSCAN31Q96LW9 406 aaPredicted RBP2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 SMC6Q96SB8 1091 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 ARPC5LQ9BPX5 153 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 PSD2Q9BQI7 771 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 DCTN5Q9BTE1 182 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 GPR63Q9BZJ6 419 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 LRMDAQ9H2I8 198 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 TRPC7Q9HCX4 862 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 TCP11L1Q9NUJ3 509 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 TMEM160Q9NX00 188 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 PAK5Q9P286 719 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 KLHL9Q9P2J3 617 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 POLG2Q9UHN1 485 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 FBXL2Q9UKC9 423 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 MRPS28Q9Y2Q9 187 aaKnown RBP2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 JRKLQ9Y4A0 524 aa2.28□□□□□ -2.04
SUB1P3-201ENST00000564581 ACACAQ13085 2346 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms