RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 SERTAD3Q9UJW9 196 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 PRKAB1Q9Y478 270 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 SACSQ9NZJ4 4579 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 IGLV3-10A0A075B6K4 115 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 BUB1O43683 1085 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 BMP10O95393 424 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 SOD1P00441 154 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 HOXB1P14653 301 aaPredicted RBP10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 EEF1DP29692 281 aaKnown RBP10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 ACVRL1P37023 503 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 CLCNKAP51800 687 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 E2F4Q16254 413 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 ACKR1Q16570 336 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 CLEC12BQ2HXU8 276 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 FBXL19-AS1Q494R0 122 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 NKAIN1Q4KMZ8 207 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 TDRD12Q587J7 1177 aaKnown RBP10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 RNFT1Q5M7Z0 435 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 CFAP58Q5T655 872 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 C1orf189Q5VU69 101 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 KLHL35Q6PF15 583 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 TRIM74Q86UV6 250 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 PHYKPLQ8IUZ5 450 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 SLC22A8Q8TCC7 542 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 ZFAND2BQ8WV99 257 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 LRRC46Q96FV0 321 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 SCMH1Q96GD3 660 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 ZNF641Q96N77 438 aaPredicted RBP10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 NCAPGQ9BPX3 1015 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 TNMDQ9H2S6 317 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 RETREG1Q9H6L5 497 aa10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 ZNF701Q9NV72 531 aaPredicted RBP10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 FOXD3Q9UJU5 478 aaPredicted RBP10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 SRPRBQ9Y5M8 271 aaKnown RBP10.21□□□□□ -0.77
HDGFL3-204ENST00000563790 TMEM89A2RUT3 159 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 GOLGA6CA6NDK9 693 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 GOLGA6BA6NDN3 693 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 DDX3YO15523 660 aaKnown RBP10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 TMCC1O94876 653 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 ONECUT2O95948 504 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 GOLGA6DP0CG33 693 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 ZNF24P17028 368 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 DPTQ07507 201 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 SQLEQ14534 574 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 RBBP7Q16576 425 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 ARTNQ5T4W7 220 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 ADAMTSL4Q6UY14 1074 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 TRIM72Q6ZMU5 477 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 AOPEPQ8N6M6 819 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 MDS2Q8NDY4 140 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 LINC01560Q8TB33 94 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 IGFBPL1Q8WX77 278 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 EPSTI1Q96J88 318 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 HSFY1Q96LI6 401 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 DOCK7Q96N67 2140 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 TTYH2Q9BSA4 534 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 HES7Q9BYE0 225 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 FAM204AQ9H8W3 233 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 WDR54Q9H977 334 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 POPDC2Q9HBU9 364 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 FANCLQ9NW38 375 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 DDIT4Q9NX09 232 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 GOLGA6AQ9NYA3 693 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 DNAH1Q9P2D7 4330 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 B4GALT7Q9UBV7 327 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 SIK3Q9Y2K2 1263 aa10.2□□□□□ -0.78
HDGFL3-204ENST00000563790 MAPK13O15264 365 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 SERPINA7P05543 415 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 GLI4P10075 376 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 LONP1P36776 959 aaKnown RBP10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 ASCL1P50553 236 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 OCLNQ16625 522 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 GPRC6AQ5T6X5 926 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 MCTP1Q6DN14 999 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 ABHD17CQ6PCB6 329 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 LEKR1Q6ZMV7 388 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 C20orf204Q6ZNR8 217 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 STXBP4Q6ZWJ1 553 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 OTOAQ7RTW8 1153 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 COX14Q96I36 57 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 SPSB2Q99619 263 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 KLHL25Q9H0H3 589 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 KLHL1Q9NR64 748 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 VPS18Q9P253 973 aa10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 DHCR7Q9UBM7 475 aaKnown RBP10.19□□□□□ -0.78
HDGFL3-204ENST00000563790 SYNJ2BP-COX16A0A087WUM0 186 aa10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 A8MX80 341 aa10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 ESPNB1AK53 854 aa10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 UQCRHP07919 91 aa10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 ARAFP10398 606 aa10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 ADH7P40394 386 aa10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 GPR1P46091 355 aa10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 ATP5J2P56134 94 aa10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 RHOAP61586 193 aa10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 SNRPFP62306 86 aaKnown RBP10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 CEBPZQ03701 1054 aaKnown RBP10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 TMEM178AQ8NBL3 297 aa10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 FAM98AQ8NCA5 519 aaKnown RBP10.18□□□□□ -0.78
HDGFL3-204ENST00000563790 FKBP10Q96AY3 582 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms