RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 NOVP48745 357 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 RPS18P62269 152 aaKnown RBP2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 PPP2R2BQ00005 443 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 GAGE2BQ13066 116 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 P2RY6Q15077 328 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 ZSCAN23Q3MJ62 389 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 GAGE2EQ4V326 116 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 XKR6Q5GH73 641 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 GKAP1Q5VSY0 366 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 GAGE2AQ6NT46 116 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 Q6ZSR9 355 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 SPAG16Q8N0X2 631 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 NGEFQ8N5V2 710 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 ZNF614Q8N883 585 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 ANKRD52Q8NB46 1076 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 OLIG1Q8TAK6 271 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 FGFBP3Q8TAT2 258 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 FAM222BQ8WU58 562 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 DDOQ99489 341 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 RBM4BQ9BQ04 359 aaKnown RBP2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 C9orf78Q9NZ63 289 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 GAGE2DQ9UEU5 116 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 ASIC3Q9UHC3 531 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 MTMR6Q9Y217 621 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 PIAS3Q9Y6X2 628 aa2.91□□□□□ -1.94
HMGB1P33-201ENST00000563485 LIPT2A6NK58 231 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 AP2A2O94973 939 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 MOCS3O95396 460 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 EDN1P05305 212 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 HSPA1AP0DMV8 641 aaKnown RBP2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 HSPA1BP0DMV9 641 aaKnown RBP2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 ACTN1P12814 892 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 TMEM11P17152 192 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 CEBPBP17676 345 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 NKX2-1P43699 371 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 LGALS3BPQ08380 585 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 GPR17Q13304 367 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 RRS1Q15050 365 aaKnown RBP2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 ASTE1Q2TB18 679 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 RARS2Q5T160 578 aaKnown RBP2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 CYP4A22Q5TCH4 519 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 SPINK14Q6IE38 97 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 ZNF613Q6PF04 617 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 CORO6Q6QEF8 472 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 SUSD1Q6UWL2 747 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 PDILTQ8N807 584 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 BMPERQ8N8U9 685 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 TMEM178AQ8NBL3 297 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 PCYOX1LQ8NBM8 494 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 IL17REQ8NFR9 667 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 DAZLQ92904 295 aaKnown RBP2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 OR2A14Q96R47 310 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 SLC22A12Q96S37 553 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 TRIM51Q9BSJ1 452 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 PLK3Q9H4B4 646 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 RPS10P5Q9NQ39 176 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 PAG1Q9NWQ8 432 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 GTF2A1LQ9UNN4 478 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 TMEM98Q9Y2Y6 226 aa2.9□□□□□ -1.95
HMGB1P33-201ENST00000563485 PRR32B1ATL7 298 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 E9PQ18 207 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 CDC123O75794 336 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 TMEM63AO94886 807 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 CDH2P19022 906 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 NMBRP28336 390 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 KRT9P35527 623 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 SNX16P57768 344 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 G3BP1Q13283 466 aaKnown RBP eCLIP2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 ENPP2Q13822 863 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 ZNF239Q16600 458 aaKnown RBP2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 TCTE1Q5JU00 501 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 DCAF10Q5QP82 559 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 GCNT6Q5T4J0 391 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 INTS11Q5TA45 600 aaKnown RBP2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 ADALQ6DHV7 355 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 FAM109BQ6ICB4 259 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 JADE1Q6IE81 842 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 METTL7BQ6UX53 244 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 TMTC3Q6ZXV5 915 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 PXKQ7Z7A4 578 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 GALNT5Q7Z7M9 940 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 KBTBD8Q8NFY9 601 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 OR1J1Q8NGS3 322 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 OR2T11Q8NH01 316 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 MORC4Q8TE76 937 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 MYADMQ96S97 322 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 LAT2Q9GZY6 243 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 SMC4Q9NTJ3 1288 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 INTS9Q9NV88 658 aaKnown RBP2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 NPAP1Q9NZP6 1156 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 PGAP2Q9UHJ9 254 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 PNMA2Q9UL42 364 aa2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 SPIN1Q9Y657 262 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P33-201ENST00000563485 PCNX3Q9H6A9 2034 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 PLEKHD1A6NEE1 506 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 A8MZ25 164 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 HS6ST1O60243 411 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 EIF3JO75822 258 aaKnown RBP2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 GH2P01242 217 aa2.88□□□□□ -1.95
HMGB1P33-201ENST00000563485 SRPRAP08240 638 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms