RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 EPHX3Q9H6B9 360 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 WDR55Q9H6Y2 383 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-208ENST00000563220 ZBTB26Q9HCK0 441 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 MBNL1Q9NR56 388 aaKnown RBP17.71■□□□□ 0.43
COMMD4-208ENST00000563220 ARMCX1Q9P291 453 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 ATXN10Q9UBB4 475 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 PCTPQ9UKL6 214 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 FIS1Q9Y3D6 152 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 A0A1B0GTL3 188 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 PLRG1O43660 514 aaKnown RBP17.71■□□□□ 0.43
COMMD4-208ENST00000563220 ATG13O75143 517 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 PAK4O96013 591 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-208ENST00000563220 PCCBP05166 539 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 MPC1LP0DKB6 136 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 AGERQ15109 404 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 PDCD2Q16342 344 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-208ENST00000563220 FBXO43Q4G163 708 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 PDPRQ8NCN5 879 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 ZNF483Q8TF39 744 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-208ENST00000563220 ASB11Q8WXH4 323 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 KLK6Q92876 244 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 SIPA1Q96FS4 1042 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 COX14Q96I36 57 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 OSBPL6Q9BZF3 934 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 RDH14Q9HBH5 336 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 SEMA4BQ9NPR2 832 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-208ENST00000563220 GULP1Q9UBP9 304 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 FAM8A1Q9UBU6 413 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 PTBP2Q9UKA9 531 aaKnown RBP17.71■□□□□ 0.43
COMMD4-208ENST00000563220 TRAF6Q9Y4K3 522 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 GOLGA8QA0A0J9YX86 632 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 GOLGA8OA6NCC3 632 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 PRR23AA6NEV1 266 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 GOLGA8NF8WBI6 632 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 TAPBPO15533 448 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 SLCO2B1O94956 709 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 SERPINA6P08185 405 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 IL9P15248 144 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 ZNF658BQ4V348 819 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-208ENST00000563220 CLEC6AQ6EIG7 209 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 ADAMTSL4Q6UY14 1074 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 ASZ1Q8WWH4 475 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 HIC2Q96JB3 615 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 MRGPRX1Q96LB2 322 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 ASB2Q96Q27 587 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 SLC40A1Q9NP59 571 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 MID1IP1Q9NPA3 183 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 EIF2B4Q9UI10 523 aaKnown RBP17.7■□□□□ 0.42
COMMD4-208ENST00000563220 NDRG2Q9UN36 371 aaKnown RBP17.7■□□□□ 0.42
COMMD4-208ENST00000563220 PDE10AQ9Y233 779 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 TMEM98Q9Y2Y6 226 aa17.7■□□□□ 0.42
COMMD4-208ENST00000563220 SLC5A10A0PJK1 596 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 E2F3O00716 465 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 CCDC22O60826 627 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 CBX6O95503 412 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 C7P10643 843 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 ZNF8P17098 575 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-208ENST00000563220 VCLP18206 1134 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 EPHA3P29320 983 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 ADPRHP54922 357 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 PCBP2Q15366 365 aaKnown RBP eCLIP17.69■□□□□ 0.421e-11■■■■■ 48
COMMD4-208ENST00000563220 BCL7AQ4VC05 210 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 SPDYAQ5MJ70 313 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 MBOAT1Q6ZNC8 495 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 ZNF547Q8IVP9 402 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 SKA2Q8WVK7 121 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-208ENST00000563220 RHBDF1Q96CC6 855 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 MSANTD3Q96H12 275 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 LGR4Q9BXB1 951 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 C1QTNF2Q9BXJ5 285 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 SLC12A9Q9BXP2 914 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 CD93Q9NPY3 652 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 ARL8BQ9NVJ2 186 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 A0A1W2PQU0 124 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 TARSP26639 723 aaKnown RBP17.69■□□□□ 0.42
COMMD4-208ENST00000563220 PBLDP30039 288 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-208ENST00000563220 PRDX3P30048 256 aaKnown RBP17.69■□□□□ 0.42
COMMD4-208ENST00000563220 FOXA1P55317 472 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 NCALDP61601 193 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 RPS21P63220 83 aaKnown RBP17.69■□□□□ 0.42
COMMD4-208ENST00000563220 BTKQ06187 659 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 LCP2Q13094 533 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 UGT3A2Q3SY77 523 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 EOGTQ5NDL2 527 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 ICE2Q659A1 982 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 UBE2R2Q712K3 238 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-208ENST00000563220 HEATR4Q86WZ0 1026 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 TP53I13Q8NBR0 393 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-208ENST00000563220 AGAP11Q8TF27 550 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 CCDC106Q9BWC9 280 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 ZCCHC2Q9C0B9 1178 aaKnown RBP17.69■□□□□ 0.42
COMMD4-208ENST00000563220 TCF7L2Q9NQB0 619 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 SAR1AQ9NR31 198 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 ZNF225Q9UK10 706 aa17.69■□□□□ 0.42
COMMD4-208ENST00000563220 PCYT1BQ9Y5K3 369 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-208ENST00000563220 CAPN14A8MX76 684 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 GFYI3L273 518 aa17.68■□□□□ 0.42
COMMD4-208ENST00000563220 RNGTTO60942 597 aaKnown RBP17.68■□□□□ 0.42
COMMD4-208ENST00000563220 SKAP2O75563 359 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-208ENST00000563220 UNC5CO95185 931 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms