RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PTPRCAPQ14761 206 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 METRNLQ641Q3 311 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 SPOCD1Q6ZMY3 1216 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 ZNF567Q8N184 647 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 D2HGDHQ8N465 521 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 OR8K5Q8NH50 307 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 ZNF398Q8TD17 642 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 NAT14Q8WUY8 206 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 CLIP3Q96DZ5 547 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 DCUN1D1Q96GG9 259 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 PSMG3-AS1Q96PY0 264 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 FCRL5Q96RD9 977 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 INSM2Q96T92 566 aaPredicted RBP12.67□□□□□ -0.38
SF3B3-202ENST00000562722 CHP1Q99653 195 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 TLR10Q9BXR5 811 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 ING2Q9H160 280 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 NHEJ1Q9H9Q4 299 aaPredicted RBP12.67□□□□□ -0.38
SF3B3-202ENST00000562722 ABHD10Q9NUJ1 306 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 SLC24A2Q9UI40 661 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 ACSL5Q9ULC5 683 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 G3BP2Q9UN86 482 aaKnown RBP12.67□□□□□ -0.38
SF3B3-202ENST00000562722 SNX7Q9UNH6 387 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 COLEC10Q9Y6Z7 277 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 NBASA2RRP1 2371 aa12.67□□□□□ -0.38
SF3B3-202ENST00000562722 FLNCQ14315 2725 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 GSAPA4D1B5 854 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 MGAT4DA6NG13 374 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 C2orf81A6NN90 581 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 MAP3K7O43318 606 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 PSTPIP1O43586 416 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 POLBP06746 335 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 POLR2CP19387 275 aaPredicted RBP12.66□□□□□ -0.38
SF3B3-202ENST00000562722 CDH3P22223 829 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 KPNA2P52292 529 aaKnown RBP12.66□□□□□ -0.38
SF3B3-202ENST00000562722 GSDMDP57764 484 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 GPS2Q13227 327 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 NADK2Q4G0N4 442 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 FHL5Q5TD97 284 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 CCDC181Q5TID7 509 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 FBXO38Q6PIJ6 1188 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 CFAP206Q8IYR0 622 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 SPDYE1Q8NFV5 336 aaPredicted RBP12.66□□□□□ -0.38
SF3B3-202ENST00000562722 OR4E2Q8NGC2 313 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 CPT1BQ92523 772 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 ZNF501Q96CX3 271 aaPredicted RBP12.66□□□□□ -0.38
SF3B3-202ENST00000562722 QKIQ96PU8 341 aaKnown RBP eCLIP12.66□□□□□ -0.38
SF3B3-202ENST00000562722 VAT1Q99536 393 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 FICDQ9BVA6 458 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 SLC7A5P2Q9GIP4 190 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 CHST8Q9H2A9 424 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 ASB8Q9H765 288 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 KIR3DX1Q9H7L2 352 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 SMOXQ9NWM0 555 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 MAP10Q9P2G4 905 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 CRLS1Q9UJA2 301 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 ARL5AQ9Y689 179 aa12.66□□□□□ -0.38
SF3B3-202ENST00000562722 SLC9B1P1A6NJY1 282 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 H7C0C1 242 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 GAPDHSO14556 408 aaPredicted RBP12.65□□□□□ -0.38
SF3B3-202ENST00000562722 MFAP3LO75121 409 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 AGTP01019 485 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 PYGMP11217 842 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 RALBP11234 206 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 LPOP22079 712 aaPredicted RBP12.65□□□□□ -0.38
SF3B3-202ENST00000562722 NDUFS1P28331 727 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 PTGIRP43119 386 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 ATP5OP48047 213 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 ADCY2Q08462 1091 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 TFDP3Q5H9I0 405 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 DAAM2Q86T65 1068 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 CARFQ8N187 725 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 ENDOVQ8N8Q3 282 aaKnown RBP12.65□□□□□ -0.38
SF3B3-202ENST00000562722 GALNT11Q8NCW6 608 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 OR4K2Q8NGD2 314 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 OR2L2Q8NH16 312 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 ZFPM2Q8WW38 1151 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 RMDN2Q96LZ7 410 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 PPM1MQ96MI6 270 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 APOL2Q9BQE5 337 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 FKBPLQ9UIM3 349 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 TRHDEQ9UKU6 1024 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 PCDHGA9Q9Y5G4 932 aaKnown RBP12.65□□□□□ -0.38
SF3B3-202ENST00000562722 HEBP2Q9Y5Z4 205 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 LRRK2Q5S007 2527 aa12.65□□□□□ -0.38
SF3B3-202ENST00000562722 MACROD2A1Z1Q3 448 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 KLHL33A6NCF5 533 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 A6NL46 340 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 HACD1B0YJ81 288 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 TMEM150CB9EJG8 249 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 MEN1O00255 615 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 ANXA9O76027 345 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 SRP72O76094 671 aaKnown RBP12.64□□□□□ -0.39
SF3B3-202ENST00000562722 ZRANB2O95218 330 aaKnown RBP eCLIP12.64□□□□□ -0.39
SF3B3-202ENST00000562722 CYP2A7P20853 494 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 PREPP48147 710 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 GEMP55040 296 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 TAF1AQ15573 450 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-202ENST00000562722 TAZQ16635 292 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 BCL7AQ4VC05 210 aa12.64□□□□□ -0.39
SF3B3-202ENST00000562722 PRAMEF17Q5VTA0 474 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms