RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 FAM46CQ5VWP2 391 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 HAUS3Q68CZ6 603 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 VWA1Q6PCB0 445 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 FOXR2Q6PJQ5 311 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 PIM3Q86V86 326 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 CCDC117Q8IWD4 279 aaPredicted RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 BRSK2Q8IWQ3 736 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 NAGSQ8N159 534 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 UBR7Q8N806 425 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 ST6GALNAC3Q8NDV1 305 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 PTCD3Q96EY7 689 aaKnown RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 SMARCD1Q96GM5 515 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 LENG8Q96PV6 779 aaPredicted RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 SPAG5Q96R06 1193 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 CTRCQ99895 268 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 FOXC2Q99958 501 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 NUDT22Q9BRQ3 303 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 FAM213AQ9BRX8 229 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 MMTAG2Q9BU76 263 aaKnown RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 SLC17A9Q9BYT1 436 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 KIAA1586Q9HCI6 787 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 PDE11AQ9HCR9 933 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 INTS13Q9NVM9 706 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 C14orf119Q9NWQ9 140 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 VSX1Q9NZR4 365 aaPredicted RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 AKAP7Q9P0M2 348 aaPredicted RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 LARSQ9P2J5 1176 aaKnown RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 RCOR3Q9P2K3 495 aaPredicted RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 APOBEC3BQ9UH17 382 aaKnown RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 IPO11Q9UI26 975 aaKnown RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 RASAL2Q9UJF2 1139 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 ADAM21Q9UKJ8 722 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 GPR34Q9UPC5 381 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 RP1P56715 2156 aa3.77□□□□□ -1.81
HERC1-211ENST00000560983 MAP1AP78559 2803 aaPredicted RBP3.77□□□□□ -1.81
HERC1-211ENST00000560983 PRRC2AP48634 2157 aaKnown RBP3.76□□□□□ -1.81
HERC1-211ENST00000560983 KMT2CQ8NEZ4 4911 aaKnown RBP3.76□□□□□ -1.81
HERC1-211ENST00000560983 KRTAP29-1A8MX34 341 aaPredicted RBP3.76□□□□□ -1.81
HERC1-211ENST00000560983 E2F3O00716 465 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 MCF2LO15068 1137 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 MPPED1O15442 326 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 KCNN4O15554 427 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 GPR39O43194 453 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 DPM1O60762 260 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 TBL1XO60907 577 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 LRCH4O75427 683 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 CREG1O75629 220 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 STK17BO94768 372 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 CTSLP07711 333 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 RALAP11233 206 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 CCDC130P13994 396 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 FDPSP14324 419 aaKnown RBP3.76□□□□□ -1.81
HERC1-211ENST00000560983 SCP2P22307 547 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 RPS6KB1P23443 525 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 DLSTP36957 453 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 ZNF131P52739 623 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 THOP1P52888 689 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 IST1P53990 364 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 CTXN1P60606 82 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 MC2RQ01718 297 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 TLE4Q04727 773 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 CHAF1BQ13112 559 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 TRA2AQ13595 282 aaKnown RBP eCLIP3.76□□□□□ -1.81
HERC1-211ENST00000560983 HLTFQ14527 1009 aaKnown RBP eCLIP3.76□□□□□ -1.81
HERC1-211ENST00000560983 KRT32Q14532 448 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 EDRF1Q3B7T1 1238 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 FAM133BQ5BKY9 247 aaKnown RBP3.76□□□□□ -1.81
HERC1-211ENST00000560983 VWA2Q5GFL6 755 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 DCAF10Q5QP82 559 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 FAXCQ5TGI0 409 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 DUS1LQ6P1R4 473 aaKnown RBP3.76□□□□□ -1.81
HERC1-211ENST00000560983 RFWD3Q6PCD5 774 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 ZNF788Q6ZQV5 615 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 CLEC20AQ6ZU45 233 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 LHFPL2Q6ZUX7 228 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 CCDC186Q7Z3E2 898 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 KDELC2Q7Z4H8 507 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 TADA2BQ86TJ2 420 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 BIVMQ86UB2 503 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 FJX1Q86VR8 437 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 KCNMB4Q86W47 210 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 SFR1Q86XK3 245 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 PHC2Q8IXK0 858 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 APCDD1Q8J025 514 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 FSTL5Q8N475 847 aaPredicted RBP3.76□□□□□ -1.81
HERC1-211ENST00000560983 C12orf29Q8N999 325 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 ACBD4Q8NC06 268 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 FDCSPQ8NFU4 85 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 SLC2A14Q8TDB8 520 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 UBE2Q2Q8WVN8 375 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 POMGNT1Q8WZA1 660 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 INPP5DQ92835 1189 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 CENPTQ96BT3 561 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 SARAFQ96BY9 339 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 MED10Q9BTT4 135 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 NUDT9Q9BW91 350 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 STRA6Q9BX79 667 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 EDEM3Q9BZQ6 932 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 SLC13A1Q9BZW2 595 aa3.76□□□□□ -1.81
HERC1-211ENST00000560983 GSTO2Q9H4Y5 243 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms