RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 HSD17B8Q92506 261 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 CNOT6LQ96LI5 555 aaKnown RBP2.1□□□□□ -2.07
SPG11-222ENST00000560435 PIGMQ9H3S5 423 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 PANK4Q9NVE7 773 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 HAO1Q9UJM8 370 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 PPP1R3CQ9UQK1 317 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 MAU2Q9Y6X3 613 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 MPTX1A8MV57 137 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 ICAM1P05362 532 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 H1F0P07305 194 aaKnown RBP2.09□□□□□ -2.07
SPG11-222ENST00000560435 MELTFP08582 738 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 SELLP14151 372 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 GP9P14770 177 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 BCL3P20749 454 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 EFNA1P20827 205 aaPredicted RBP2.09□□□□□ -2.07
SPG11-222ENST00000560435 CPOXP36551 454 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 PRCPP42785 496 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 MTHFRP42898 656 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 PIP4K2AP48426 406 aaPredicted RBP2.09□□□□□ -2.07
SPG11-222ENST00000560435 ARL4CP56559 192 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 TAF13Q15543 124 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 MOGAT2Q3SYC2 334 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 DCAF10Q5QP82 559 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 SDCCAG8Q86SQ7 713 aaPredicted RBP2.09□□□□□ -2.07
SPG11-222ENST00000560435 ZNF554Q86TJ5 538 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 GPD1LQ8N335 351 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 GTF3C6Q969F1 213 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 AZIN2Q96A70 460 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 C1orf147Q96MC9 270 aaPredicted RBP2.09□□□□□ -2.07
SPG11-222ENST00000560435 FUZQ9BT04 418 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 SEMA6AQ9H2E6 1030 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 ATP13A3Q9H7F0 1226 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 KCND2Q9NZV8 630 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 ABI3Q9P2A4 366 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 B4GALT7Q9UBV7 327 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 ZNF107Q9UII5 783 aaPredicted RBP2.09□□□□□ -2.07
SPG11-222ENST00000560435 ZNF256Q9Y2P7 627 aaPredicted RBP2.09□□□□□ -2.07
SPG11-222ENST00000560435 KIF25-AS1Q9Y6Z4 181 aa2.09□□□□□ -2.07
SPG11-222ENST00000560435 hCG_1642624A0A1W2PR95 340 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 C15orf61A6NNL5 157 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 ZNF195O14628 629 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 MAP2K7O14733 419 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 ATP2A1O14983 1001 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 IPO7O95373 1038 aaKnown RBP2.08□□□□□ -2.08
SPG11-222ENST00000560435 HRH2P25021 359 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 ZFP36L2P47974 494 aaKnown RBP2.08□□□□□ -2.08
SPG11-222ENST00000560435 TMEM50BP56557 158 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 TBX4P57082 545 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 CYCSP99999 105 aaKnown RBP2.08□□□□□ -2.08
SPG11-222ENST00000560435 UBE3AQ05086 875 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 LRMPQ12912 555 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 CAMK1Q14012 370 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 PDCD2Q16342 344 aaPredicted RBP2.08□□□□□ -2.08
SPG11-222ENST00000560435 PTAR1Q7Z6K3 402 aaPredicted RBP2.08□□□□□ -2.08
SPG11-222ENST00000560435 ZNF354CQ86Y25 554 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 VPS37AQ8NEZ2 397 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 KBTBD8Q8NFY9 601 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 OR1J1Q8NGS3 322 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 PSPC1Q8WXF1 523 aaKnown RBP2.08□□□□□ -2.08
SPG11-222ENST00000560435 TOMM40LQ969M1 308 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 CENPTQ96BT3 561 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 KIF1BPQ96EK5 621 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 MYADMQ96S97 322 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 PRKRIP1Q9H875 184 aaPredicted RBP2.08□□□□□ -2.08
SPG11-222ENST00000560435 MIOSQ9NXC5 875 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 B3GALT5Q9Y2C3 310 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 ANGPTL3Q9Y5C1 460 aa2.08□□□□□ -2.08
SPG11-222ENST00000560435 SRRM4A7MD48 611 aaKnown RBP2.07□□□□□ -2.08
SPG11-222ENST00000560435 ZBTB43O43298 467 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 NKX2-2O95096 273 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 PIGNO95427 931 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 CYP2A7P20853 494 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 ABCD1P33897 745 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 ARL1P40616 181 aaPredicted RBP2.07□□□□□ -2.08
SPG11-222ENST00000560435 MAPK9P45984 424 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 CCR5P51681 352 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 PAX9P55771 341 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 LYZP61626 148 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 MRPS34P82930 218 aaKnown RBP2.07□□□□□ -2.08
SPG11-222ENST00000560435 ZBED6P86452 979 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 RFTN1Q14699 578 aaPredicted RBP2.07□□□□□ -2.08
SPG11-222ENST00000560435 MVPQ14764 893 aaKnown RBP2.07□□□□□ -2.08
SPG11-222ENST00000560435 FHL5Q5TD97 284 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 ANO1Q5XXA6 986 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 KLC3Q6P597 504 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 CORO6Q6QEF8 472 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 IGFL3Q6UXB1 125 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 VITQ6UXI7 678 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 CCDC190Q86UF4 302 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 NIPA2Q8N8Q9 360 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.07□□□□□ -2.08
SPG11-222ENST00000560435 OLIG1Q8TAK6 271 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 LRRC15Q8TF66 581 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 SLC45A3Q96JT2 553 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 GFI1Q99684 422 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 RANBP17Q9H2T7 1088 aaKnown RBP2.07□□□□□ -2.08
SPG11-222ENST00000560435 ACKR4Q9NPB9 350 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 MBNL1Q9NR56 388 aaKnown RBP2.07□□□□□ -2.08
SPG11-222ENST00000560435 SPHK2Q9NRA0 654 aa2.07□□□□□ -2.08
SPG11-222ENST00000560435 TEX10Q9NXF1 929 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms