RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 MYRIPQ8NFW9 859 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 FAM45AQ8TCE6 357 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 ASZ1Q8WWH4 475 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 GLMNQ92990 594 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 TMEM159Q96B96 161 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 VPS39Q96JC1 886 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 CAMK1GQ96NX5 476 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 RBBP8Q99708 897 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 WWP1Q9H0M0 922 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 GALPQ9UBC7 116 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 VWA7Q9Y334 891 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 IKBKGQ9Y6K9 419 aa20.85■□□□□ 0.93
CASC4-204ENST00000557945 FAM95CA0A1B0GW59 222 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 INHBAP08476 426 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 F3P13726 295 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 SPRP35270 261 aaPredicted RBP20.84■□□□□ 0.93
CASC4-204ENST00000557945 HSD17B3P37058 310 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 HALP42357 657 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 MSH2P43246 934 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 CDKN2DP55273 166 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 ILF2Q12905 390 aaKnown RBP20.84■□□□□ 0.93
CASC4-204ENST00000557945 ZNF658BQ4V348 819 aaPredicted RBP20.84■□□□□ 0.93
CASC4-204ENST00000557945 ARL10Q8N8L6 244 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 SIDT2Q8NBJ9 832 aaKnown RBP20.84■□□□□ 0.93
CASC4-204ENST00000557945 PATE1Q8WXA2 126 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 GPR21Q99679 349 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 CCDC77Q9BR77 488 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 TAS2R13Q9NYV9 303 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 TRMT6Q9UJA5 497 aaKnown RBP20.84■□□□□ 0.93
CASC4-204ENST00000557945 WDR37Q9Y2I8 494 aa20.84■□□□□ 0.93
CASC4-204ENST00000557945 DNAH14Q0VDD8 3507 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 SLC5A10A0PJK1 596 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 A6NCN8 305 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 CTIFO43310 598 aaKnown RBP20.83■□□□□ 0.92
CASC4-204ENST00000557945 ERLIN1O75477 346 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 MYF5P13349 255 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 SLC2A4P14672 509 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 PDHA2P29803 388 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 CLCN7P51798 805 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 LIMK2P53671 638 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 PLOD1Q02809 727 aaPredicted RBP20.83■□□□□ 0.92
CASC4-204ENST00000557945 RPA4Q13156 261 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 AGAP9Q5VTM2 703 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 UGT3A1Q6NUS8 523 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 XKR5Q6UX68 686 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 WASH2PQ6VEQ5 465 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 ZBTB2Q8N680 514 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 KYQ8NBH2 561 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 ACVR1CQ8NER5 493 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 SLC44A1Q8WWI5 657 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 APOLD1Q96LR9 279 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 PAFAH2Q99487 392 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 MCMBPQ9BTE3 642 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 WASH6PQ9NQA3 447 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 PCOLCE2Q9UKZ9 415 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 SLC39A10Q9ULF5 831 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 MED16Q9Y2X0 877 aa20.83■□□□□ 0.92
CASC4-204ENST00000557945 MTO1Q9Y2Z2 717 aaKnown RBP20.83■□□□□ 0.92
CASC4-204ENST00000557945 ZFC3H1O60293 1989 aaKnown RBP20.82■□□□□ 0.92
CASC4-204ENST00000557945 NOBOXO60393 691 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 LDOC1O95751 146 aaPredicted RBP20.82■□□□□ 0.92
CASC4-204ENST00000557945 BRAFP15056 766 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 RPIAP49247 311 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 SLC12A2P55011 1212 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 MAZP56270 477 aaKnown RBP20.82■□□□□ 0.92
CASC4-204ENST00000557945 BIRC2Q13490 618 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 CLCA4Q14CN2 919 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 TTLL9Q3SXZ7 439 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 PLEKHS1Q5SXH7 462 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 IYDQ6PHW0 289 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 OGFOD3Q6PK18 319 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 ABRAXAS1Q6UWZ7 409 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 PIM3Q86V86 326 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 SLC35F3Q8IY50 421 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 NAGSQ8N159 534 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 SPDYE1Q8NFV5 336 aaPredicted RBP20.82■□□□□ 0.92
CASC4-204ENST00000557945 INPP5DQ92835 1189 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 CNDP2Q96KP4 475 aaKnown RBP20.82■□□□□ 0.92
CASC4-204ENST00000557945 SLC30A3Q99726 388 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 OLFM1Q99784 485 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 SCHIP1Q9P0W5 487 aaPredicted RBP20.82■□□□□ 0.92
CASC4-204ENST00000557945 FTSJ1Q9UET6 329 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 TSR3Q9UJK0 312 aaKnown RBP20.82■□□□□ 0.92
CASC4-204ENST00000557945 CDV3Q9UKY7 258 aaKnown RBP20.82■□□□□ 0.92
CASC4-204ENST00000557945 DHRS7Q9Y394 339 aa20.82■□□□□ 0.92
CASC4-204ENST00000557945 ARHGEF17Q96PE2 2063 aaPredicted RBP20.81■□□□□ 0.92
CASC4-204ENST00000557945 ARID1BQ8NFD5 2236 aaPredicted RBP20.81■□□□□ 0.92
CASC4-204ENST00000557945 ZNF292O60281 2723 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 KIR2DS5A0A0G2JLQ3 304 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 A0A0G2JNG1 304 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 OR5K4A6NMS3 321 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 OR52A4PA6NMU1 304 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 KIR2DS3K7RE56 304 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 IFRD1O00458 451 aaPredicted RBP20.81■□□□□ 0.92
CASC4-204ENST00000557945 GPC4O75487 556 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 ITGA2BP08514 1039 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 FDXRP22570 491 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 SKIV2L2P42285 1042 aaKnown RBP20.81■□□□□ 0.92
CASC4-204ENST00000557945 DAB2P98082 770 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 PDAP1Q13442 181 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms